RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 NUP107P57740 925 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 ASRGL1Q7L266 308 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 TMEM199Q8N511 208 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 SYNDIG1Q9H7V2 258 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 CYP4F11Q9HBI6 524 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 DSEQ9UL01 958 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 TRPV2Q9Y5S1 764 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 NFKBIEO00221 500 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 EEF2KO00418 725 aaKnown RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 GSC2O15499 205 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 MARSP56192 900 aaKnown RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 DLG4P78352 724 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 KCTD19Q17RG1 926 aaPredicted RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 FAM110CQ1W6H9 321 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 FBXO47Q5MNV8 452 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 NET1Q7Z628 596 aaPredicted RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 SH3KBP1Q96B97 665 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 SNTG2Q9NY99 539 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■□□□□ 8.1
COPA-201ENST00000241704 APOBEC2Q9Y235 224 aaKnown RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 IGLV3-22A0A075B6J6 115 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 KLRC2P26717 231 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 AXLP30530 894 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 EPHB3P54753 998 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 ALDH18A1P54886 795 aaKnown RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 NCKAP1LP55160 1127 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 CDH18Q13634 790 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 PDK3Q15120 406 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 TBCCQ15814 346 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 UGCGQ16739 394 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 ACAD11Q709F0 780 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 TMEM120AQ9BXJ8 343 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.31□□□□□ -0.6
COPA-201ENST00000241704 EPS15L1Q9UBC2 864 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 MSRAQ9UJ68 235 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 BARX2Q9UMQ3 279 aaPredicted RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 LSM1O15116 133 aaKnown RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 MBL2P11226 248 aaPredicted RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 STIP1P31948 543 aaKnown RBP11.31□□□□□ -0.6
COPA-201ENST00000241704 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 BCAT1P54687 386 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 CCL23P55773 120 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 RASA2Q15283 850 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 KDELC2Q7Z4H8 507 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 ANKMY2Q8IV38 441 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 ATPAF2Q8N5M1 289 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 HES6Q96HZ4 224 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 CNBD2Q96M20 576 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 GANQ9H2C0 597 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 GID8Q9NWU2 228 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 ARHGEF38Q9NXL2 777 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 SATB2Q9UPW6 733 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 CHKBQ9Y259 395 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 UBA6A0AVT1 1052 aaPredicted RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 TRIM43BA6NCK2 446 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 TNFAIP8O95379 198 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ZBTB48P10074 688 aaPredicted RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 KITP10721 976 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 SLC11A2P49281 568 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 PDK1Q15118 436 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 PRPF39Q86UA1 669 aaKnown RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 GDPD5Q8WTR4 605 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ADAM2Q99965 735 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 CHEK2O96017 543 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ADRB2P07550 413 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ALOX15P16050 662 aaPredicted RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 LSAMPQ13449 338 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ANO4Q32M45 955 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ADGRF2Q8IZF7 708 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 EXD1Q8NHP7 514 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 JADE3Q92613 823 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 DCUN1D1Q96GG9 259 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 CNPY3Q9BT09 278 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 FRMD8P1Q9BZ68 369 aaPredicted RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 NDEL1Q9GZM8 345 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 PLGRKTQ9HBL7 147 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 XAB2Q9HCS7 855 aaKnown RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 PDE4DIPQ5VU43 2346 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 LACTBL1A8MY62 500 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 BTBD19C9JJ37 291 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 AP3B1O00203 1094 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 EDF1O60869 148 aaKnown RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 EIF2B2P49770 351 aaKnown RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 NSUN2Q08J23 767 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPA-201ENST00000241704 TWF1Q12792 350 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ARHGEF7Q14155 803 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 PDK4Q16654 411 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 OR52E8Q6IFG1 317 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ABHD15Q6UXT9 468 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 C4orf22Q6V702 233 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 NCCRP1Q6ZVX7 275 aaPredicted RBP11.3□□□□□ -0.6
COPA-201ENST00000241704 TUBGCP5Q96RT8 1024 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
COPA-201ENST00000241704 VPS11Q9H270 941 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms