RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PLA2G4CQ9UP65 541 aa21.29■■□□□ 1
SNX3-201ENST00000230085 TBC1D30Q9Y2I9 924 aa21.29■■□□□ 1
SNX3-201ENST00000230085 SLC4A7Q9Y6M7 1214 aa21.29■■□□□ 1
SNX3-201ENST00000230085 RANBP2P49792 3224 aaKnown RBP21.29■■□□□ 1
SNX3-201ENST00000230085 PDE4DIPQ5VU43 2346 aa21.29■■□□□ 1
SNX3-201ENST00000230085 LAMA2P24043 3122 aaKnown RBP21.29■■□□□ 1
SNX3-201ENST00000230085 A0A0G2JND7 137 aa21.28■■□□□ 1
SNX3-201ENST00000230085 LRRIQ4A6NIV6 560 aa21.28■■□□□ 1
SNX3-201ENST00000230085 FCHO1O14526 889 aa21.28■■□□□ 1
SNX3-201ENST00000230085 TCF4P15884 667 aa21.28■■□□□ 1
SNX3-201ENST00000230085 CRABP2P29373 138 aa21.28■■□□□ 1
SNX3-201ENST00000230085 RPL22P35268 128 aaKnown RBP21.28■■□□□ 1
SNX3-201ENST00000230085 CCNFP41002 786 aa21.28■■□□□ 1
SNX3-201ENST00000230085 MLLT1Q03111 559 aaPredicted RBP21.28■■□□□ 1
SNX3-201ENST00000230085 HNRNPDQ14103 355 aaKnown RBP21.28■■□□□ 1
SNX3-201ENST00000230085 KAZNQ674X7 775 aa21.28■■□□□ 1
SNX3-201ENST00000230085 ZNF410Q86VK4 478 aa21.28■■□□□ 1
SNX3-201ENST00000230085 MYLK4Q86YV6 388 aaPredicted RBP21.28■■□□□ 1
SNX3-201ENST00000230085 ZDHHC7Q9NXF8 308 aa21.28■■□□□ 1
SNX3-201ENST00000230085 TANC1Q9C0D5 1861 aa21.28■■□□□ 1
SNX3-201ENST00000230085 SSR1P43307 286 aaKnown RBP21.28■■□□□ 1
SNX3-201ENST00000230085 SERPINB4P48594 390 aa21.28■■□□□ 1
SNX3-201ENST00000230085 SH3BGRP55822 239 aaPredicted RBP21.28■■□□□ 1
SNX3-201ENST00000230085 OGDHQ02218 1023 aa21.28■■□□□ 1
SNX3-201ENST00000230085 SLC25A11Q02978 314 aaKnown RBP21.28■■□□□ 1
SNX3-201ENST00000230085 DYNC1I2Q13409 638 aaKnown RBP21.28■■□□□ 1
SNX3-201ENST00000230085 FBXO47Q5MNV8 452 aa21.28■■□□□ 1
SNX3-201ENST00000230085 TMCO4Q5TGY1 634 aa21.28■■□□□ 1
SNX3-201ENST00000230085 ANKRD22Q5VYY1 191 aa21.28■■□□□ 1
SNX3-201ENST00000230085 AAGABQ6PD74 315 aa21.28■■□□□ 1
SNX3-201ENST00000230085 DEFB128Q7Z7B8 93 aa21.28■■□□□ 1
SNX3-201ENST00000230085 PHLDB2Q86SQ0 1253 aa21.28■■□□□ 1
SNX3-201ENST00000230085 LRRC6Q86X45 466 aa21.28■■□□□ 1
SNX3-201ENST00000230085 TMEM199Q8N511 208 aa21.28■■□□□ 1
SNX3-201ENST00000230085 ACTL9Q8TC94 416 aa21.28■■□□□ 1
SNX3-201ENST00000230085 UCMAQ8WVF2 138 aa21.28■■□□□ 1
SNX3-201ENST00000230085 WDR60Q8WVS4 1066 aa21.28■■□□□ 1
SNX3-201ENST00000230085 MINDY3Q9H8M7 445 aa21.28■■□□□ 1
SNX3-201ENST00000230085 AGO3Q9H9G7 860 aaKnown RBP21.28■■□□□ 1
SNX3-201ENST00000230085 AGO2Q9UKV8 859 aaKnown RBP21.28■■□□□ 1
SNX3-201ENST00000230085 TEX264Q9Y6I9 313 aa21.28■■□□□ 1
SNX3-201ENST00000230085 F8VP50 259 aa21.27■■□□□ 1
SNX3-201ENST00000230085 PDLIM1O00151 329 aa21.27■■□□□ 1
SNX3-201ENST00000230085 TM7SF2O76062 418 aa21.27■■□□□ 1
SNX3-201ENST00000230085 C1QAP02745 245 aa21.27■■□□□ 1
SNX3-201ENST00000230085 TNNI1P19237 187 aa21.27■■□□□ 1
SNX3-201ENST00000230085 NAMPTP43490 491 aa21.27■■□□□ 1
SNX3-201ENST00000230085 CACNA2D1P54289 1103 aa21.27■■□□□ 1
SNX3-201ENST00000230085 ACTR3P61158 418 aa21.27■■□□□ 1
SNX3-201ENST00000230085 ZBTB16Q05516 673 aa21.27■■□□□ 1
SNX3-201ENST00000230085 LPIN1Q14693 890 aa21.27■■□□□ 1
SNX3-201ENST00000230085 ACAP1Q15027 740 aa21.27■■□□□ 1
SNX3-201ENST00000230085 EFTUD2Q15029 972 aaKnown RBP eCLIP21.27■■□□□ 1
SNX3-201ENST00000230085 PDCD2Q16342 344 aaPredicted RBP21.27■■□□□ 1
SNX3-201ENST00000230085 ANKMY2Q8IV38 441 aa21.27■■□□□ 1
SNX3-201ENST00000230085 PALM2Q8IXS6 379 aa21.27■■□□□ 1
SNX3-201ENST00000230085 VWCEQ96DN2 955 aa21.27■■□□□ 1
SNX3-201ENST00000230085 GCOM2Q9BZD3 368 aaPredicted RBP21.27■■□□□ 1
SNX3-201ENST00000230085 SIRPGQ9P1W8 387 aa21.27■■□□□ 1
SNX3-201ENST00000230085 PTPRJQ12913 1337 aa21.27■■□□□ 1
SNX3-201ENST00000230085 LTBP2Q14767 1821 aa21.27■■□□□ 1
SNX3-201ENST00000230085 DARSP14868 501 aaKnown RBP21.26■□□□□ 0.99
SNX3-201ENST00000230085 GJC1P36383 396 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 PGM1P36871 562 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 LIG4P49917 911 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 XIAPP98170 497 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 OTUD4Q01804 1114 aaKnown RBP21.26■□□□□ 0.99
SNX3-201ENST00000230085 SLC5A9Q2M3M2 681 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 PASD1Q8IV76 773 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 SSX2IPQ9Y2D8 614 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 NUB1Q9Y5A7 615 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 CNTNAP2Q9UHC6 1331 aa21.26■□□□□ 0.99
SNX3-201ENST00000230085 FKBP6O75344 327 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 TMEM63AO94886 807 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 ASS1P00966 412 aaKnown RBP21.25■□□□□ 0.99
SNX3-201ENST00000230085 STIP1P31948 543 aaKnown RBP21.25■□□□□ 0.99
SNX3-201ENST00000230085 POU5F1BQ06416 359 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 OVGP1Q12889 678 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 DTNBP1Q96EV8 351 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 MCEEQ96PE7 176 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 WWP1Q9H0M0 922 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 STN1Q9H668 368 aaKnown RBP21.25■□□□□ 0.99
SNX3-201ENST00000230085 FBXO6Q9NRD1 293 aaPredicted RBP21.25■□□□□ 0.99
SNX3-201ENST00000230085 KLHL11Q9NVR0 708 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.25■□□□□ 0.99
SNX3-201ENST00000230085 APOC4-APOC2K7ER74 178 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 TRDMT1O14717 391 aaKnown RBP21.25■□□□□ 0.99
SNX3-201ENST00000230085 CHADO15335 359 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 PARNO95453 639 aaKnown RBP21.25■□□□□ 0.99
SNX3-201ENST00000230085 APOC2P02655 101 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 MYL2P10916 166 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 CD52P31358 61 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 MAGEA6P43360 314 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 PHKA2P46019 1235 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 CLCN2P51788 898 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 C6orf163Q5TEZ5 329 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 FOXB2Q5VYV0 432 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 ATG16L1Q676U5 607 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 SPOPLQ6IQ16 392 aa21.25■□□□□ 0.99
SNX3-201ENST00000230085 DCUN1D2Q6PH85 259 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms