RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PTK7Q13308 1070 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 MTM1Q13496 603 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 DPYSL2Q16555 572 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 SV2CQ496J9 727 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 CENPIQ92674 756 aaPredicted RBP22.98■■□□□ 1.27
CCDC9-201ENST00000221922 APOPT1Q96IL0 206 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 SERAC1Q96JX3 654 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 HSFY1Q96LI6 401 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 C11orf84Q9BUA3 381 aaPredicted RBP22.98■■□□□ 1.27
CCDC9-201ENST00000221922 PNPLA8Q9NP80 782 aa22.98■■□□□ 1.27
CCDC9-201ENST00000221922 FAM155BO75949 473 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 IL1BP01584 269 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 KBTBD12Q3ZCT8 623 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 BZW1Q7L1Q6 419 aaKnown RBP22.97■■□□□ 1.27
CCDC9-201ENST00000221922 APPL2Q8NEU8 664 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 TSSK1BQ9BXA7 367 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 NRDE2Q9H7Z3 1164 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 RNF19AQ9NV58 838 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 KBTBD13C9JR72 458 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 PDGFRBP09619 1106 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 CCDC130P13994 396 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 CYP2F1P24903 491 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 ADORA2BP29275 332 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 MAGEA6P43360 314 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 NRLP54845 237 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 SOX4Q06945 474 aaPredicted RBP22.97■■□□□ 1.27
CCDC9-201ENST00000221922 OVGP1Q12889 678 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 CA9Q16790 459 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 PPP6R3Q5H9R7 873 aaPredicted RBP22.97■■□□□ 1.27
CCDC9-201ENST00000221922 DCTN4Q9UJW0 460 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 IKBKGQ9Y6K9 419 aa22.97■■□□□ 1.27
CCDC9-201ENST00000221922 DNAJC6O75061 913 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 TPBGLP0DKB5 382 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 RBL1P28749 1068 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 NR2C2P49116 596 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 PRKD1Q15139 912 aaPredicted RBP22.96■■□□□ 1.27
CCDC9-201ENST00000221922 TNIP3Q96KP6 325 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 TUBB6Q9BUF5 446 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 LRRC42Q9Y546 428 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 INHBAP08476 426 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 L1CAMP32004 1257 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 MRPS6P82932 125 aaKnown RBP22.96■■□□□ 1.27
CCDC9-201ENST00000221922 FAAP100Q0VG06 881 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 CRHR2Q13324 411 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 LRRC6Q86X45 466 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 ARRDC4Q8NCT1 418 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 TRPV1Q8NER1 839 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 MTG1Q9BT17 334 aaPredicted RBP22.96■■□□□ 1.27
CCDC9-201ENST00000221922 KCNK13Q9HB14 408 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 SCN10AQ9Y5Y9 1956 aa22.96■■□□□ 1.27
CCDC9-201ENST00000221922 MYADML2A6NDP7 307 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 HUS1O60921 280 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 C1QAP02745 245 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 C6orf222P0C671 652 aaPredicted RBP22.95■■□□□ 1.26
CCDC9-201ENST00000221922 LCP1P13796 627 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 LRPAP1P30533 357 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 GJA9P57773 515 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 YWHAGP61981 247 aaKnown RBP eCLIP22.95■■□□□ 1.26
CCDC9-201ENST00000221922 EFHC1Q5JVL4 640 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 TWF2Q6IBS0 349 aaKnown RBP22.95■■□□□ 1.26
CCDC9-201ENST00000221922 PTCD3Q96EY7 689 aaKnown RBP22.95■■□□□ 1.26
CCDC9-201ENST00000221922 NUDCD1Q96RS6 583 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 LPIN3Q9BQK8 851 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 DHX35Q9H5Z1 703 aaKnown RBP22.95■■□□□ 1.26
CCDC9-201ENST00000221922 DENND2DQ9H6A0 471 aaPredicted RBP22.95■■□□□ 1.26
CCDC9-201ENST00000221922 ETNK2Q9NVF9 386 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 SUFUQ9UMX1 484 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 AP4E1Q9UPM8 1137 aa22.95■■□□□ 1.26
CCDC9-201ENST00000221922 MTO1Q9Y2Z2 717 aaKnown RBP22.95■■□□□ 1.26
CCDC9-201ENST00000221922 HCRTO43612 131 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 STRADAQ7RTN6 431 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 TOP6BLQ8N6T0 577 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 MIPEPQ99797 713 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 GOLGA2P5Q9HBQ8 144 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.94■■□□□ 1.26
CCDC9-201ENST00000221922 HEY2Q9UBP5 337 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 GTF2IRD1Q9UHL9 959 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 A0A0G2JND7 137 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 KLF11O14901 512 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 CCDC22O60826 627 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 DLDP09622 509 aaKnown RBP22.94■■□□□ 1.26
CCDC9-201ENST00000221922 WARSP23381 471 aaKnown RBP22.94■■□□□ 1.26
CCDC9-201ENST00000221922 LMO2P25791 158 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 CTGFP29279 349 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 ARFIP2P53365 341 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 LILRA4P59901 499 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 SREBF2Q12772 1141 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 ADGRF2Q8IZF7 708 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 MCUQ8NE86 351 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 SLC2A14Q8TDB8 520 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 CLEC4CQ8WTT0 213 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 SKA1Q96BD8 255 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 LRRC39Q96DD0 335 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 FAM111AQ96PZ2 611 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 PRDM16Q9HAZ2 1276 aa22.94■■□□□ 1.26
CCDC9-201ENST00000221922 ALG13Q9NP73 1137 aaKnown RBP22.94■■□□□ 1.26
CCDC9-201ENST00000221922 M0QZ92 97 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 PTGESO14684 152 aa22.93■■□□□ 1.26
CCDC9-201ENST00000221922 XPO1O14980 1071 aaKnown RBP22.93■■□□□ 1.26
CCDC9-201ENST00000221922 HAUS5O94927 633 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms