RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Eef1dP57776 281 aaKnown RBP12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Tpm2P58774 284 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Smpdl3aP70158 445 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Htr4P97288 388 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Pou6f1Q07916 301 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Agap2Q3UHD9 1186 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Naf1Q3UMQ8 489 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Tars2Q3UQ84 723 aaKnown RBP12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Ermp1Q3UVK0 898 aaKnown RBP12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Trav8d-2Q5R1B6 112 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Wee2Q66JT0 555 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Gpr156Q6PCP7 798 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Tdpoz2Q717B2 364 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 FukQ7TMC8 1090 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Mib1Q80SY4 1006 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Spon2Q8BMS2 330 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Bicdl2Q8CHW5 507 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Mta1Q8K4B0 715 aaKnown RBP12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Papd4Q91YI6 484 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Asb11Q9CQ31 323 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Lamtor5Q9D1L9 91 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Cul2Q9D4H8 745 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 Mapk13Q9Z1B7 366 aa12.65□□□□□ -0.38
Ccdc28a-202ENSMUST00000080860 VcanQ62059 3357 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Acnat1A2AKK5 416 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Znf804aA2AKY4 1200 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Mpig6bD7PDD4 242 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Apol11aE9PZG0 334 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Gm7694J3QNH8 270 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Cfap73J3QPZ5 306 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Vmn2r54K7N649 806 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Vmn1r86L7N213 316 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Cdk14O35495 469 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Phox2bO35690 314 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Kcnu1O54982 1121 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Pde8aO88502 823 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Sp1O89090 784 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 TecP24604 630 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Sox5P35710 763 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Gjb5Q02739 271 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Smarcad1Q04692 1021 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 TceancQ3US16 359 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Cfhr2Q4LDF6 332 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Gpr19Q61121 415 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Sema3cQ62181 751 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Lemd2Q6DVA0 511 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Amer3Q6NS69 780 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Kxd1Q80XH1 177 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 C5ar2Q8BW93 344 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 TdrpQ8C5P7 182 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 HnrnplQ8R081 586 aaKnown RBP12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Klhl36Q8R124 613 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Ctage5Q8R311 779 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Ccdc9Q8VC31 543 aaKnown RBP12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Cox18Q8VC74 331 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Mical1Q8VDP3 1048 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 PigxQ99LV7 254 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Herpud2Q9JJC9 404 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 M1apQ9Z0E1 529 aa12.64□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Gm13283A0A087WPG5 182 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Igkv6-29A0A0G2JEI6 115 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 4933424G06RikA0A140LIP3 267 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Fam71aB7XG49 585 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 4930558K02RikE0CXC6 182 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Gm7714E9Q079 131 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 4930426L09RikE9Q0N7 123 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Usp2O88623 613 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 RaraP11416 462 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 CtscP97821 462 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Phactr1Q2M3X8 580 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 NfkbidQ2TB02 327 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Muc3aQ3U5A2 218 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 SpdyaQ5IBH7 310 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Taar7aQ5QD12 358 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Slc5a10Q5SWY8 596 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Stip1Q60864 543 aaKnown RBP12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 MmeQ61391 750 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Mns1Q61884 491 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Cyp3a13Q64464 503 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Rxfp1Q6R6I7 758 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Rimbp2Q80U40 1072 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Znf750Q8BH05 703 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Neto2Q8BNJ6 525 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Nup54Q8BTS4 510 aaKnown RBP12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Gucd1Q8BZI6 239 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Arhgap12Q8C0D4 838 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Fam221bQ8C627 487 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 MmaaQ8C7H1 415 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Adamts2Q8C9W3 1213 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Mcoln2Q8K595 566 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 BbxQ8VBW5 907 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 LipfQ9CPP7 395 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Rpl34Q9D1R9 117 aaKnown RBP12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Rnf225Q9D7D1 332 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Cyp2c55Q9D816 490 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 SelenooQ9DBC0 667 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Lat2Q9JHL0 203 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Prmt1Q9JIF0 371 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 FastkQ9JIX9 511 aa12.63□□□□□ -0.39
Ccdc28a-202ENSMUST00000080860 Eif4hQ9WUK2 248 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms