RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Shroom1Q5SX79 823 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rmnd5aQ80YQ8 391 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Cpsf4Q8BQZ5 211 aaKnown RBP9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Snx17Q8BVL3 470 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vmn1r218Q8R261 298 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rab14Q91V41 215 aaKnown RBP9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Pih1d1Q9CQJ2 290 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Mtfr1lQ9CWE0 289 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tmed5Q9CXE7 229 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Spata1Q9D5R4 444 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tbx20Q9ES03 445 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vmn2r7E9PYL5 915 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vmn2r3H3BJ88 915 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vmn2r6H3BK29 913 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Pole2O54956 527 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Adam15O88839 864 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ptpn11P35235 597 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 R3hdm2Q80TM6 1044 aaKnown RBP9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Thoc5Q8BKT7 683 aaKnown RBP9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gpr180Q8BPS4 441 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 SowahdQ8BY98 327 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Depdc1aQ8CIG0 804 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rprd1aQ8VDS4 312 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Kiaa2013Q91X21 634 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Necab2Q91ZP9 389 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Syt12Q920N7 421 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Nrf1Q9WU00 503 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Morc1Q9WVL5 950 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Top3bQ9Z321 862 aaKnown RBP9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Myo5cE9Q1F5 1742 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gm5415E9PXF3 478 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rpl21O09167 160 aaKnown RBP9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 HpcaP84075 193 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Etv6P97360 485 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Fbxw10Q5SUS0 1030 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gpbp1l1Q6NZP2 473 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Magee1Q6PCZ4 918 aaKnown RBP9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Olfr1057Q7TR75 315 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 D630039A03RikQ8K0M7 236 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 MyocdQ8VIM5 935 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Fig4Q91WF7 907 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rwdd4Q9CPR1 188 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Fam187aQ9D3R5 417 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Actrt1Q9D9J3 376 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Pou5f2Q9DAC9 329 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 PrkcdP28867 674 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Cdc16Q8R349 620 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 MypopQ8R4U1 393 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Sfmbt1Q9JMD1 863 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ms4a14A0A087WSD2 1232 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Pknox1O70477 436 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vti1bO88384 232 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 AmhP27106 555 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Nr2c2P49117 596 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Plk1Q07832 603 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Znf112Q0VAW7 879 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Q32P12 615 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Cul4aQ3TCH7 759 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Kank2Q8BX02 843 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 4932414N04RikQ8CEQ9 752 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rnf219Q8K2Y0 722 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Mcrs1Q99L90 462 aa9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Fam32aQ9CR80 112 aaKnown RBP9.61□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Neurl4Q5NCX5 1563 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 1700031M16RikA0A087WSH0 82 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ripor3A1L3T7 938 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Prdm12A2AJ77 365 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vmn2r74E9PW21 853 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Birc5O70201 140 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Glud1P26443 558 aaKnown RBP9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 LvrnQ2KHK3 559 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Acsbg2Q2XU92 667 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Nutm2Q3V0C3 733 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Znf569Q80W31 679 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Lamtor4Q8CF66 99 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Retreg1dQ8VE91 480 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 NcaldQ91X97 193 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Acot13Q9CQR4 140 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Cul2Q9D4H8 745 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Zcchc11B2RX14 1644 aaKnown RBP9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Siah3B2RWG3 268 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 TecP24604 630 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tekt4Q149S1 447 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Glt6d1Q2NKH9 311 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Klra3Q64329 266 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Zbtb5Q7TQG0 670 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Tarsl2Q8BLY2 790 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Ythdf3Q8BYK6 585 aaKnown RBP9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Prdm8Q8BZ97 687 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Pgm5Q8BZF8 567 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Nlrp4bQ8C6J9 863 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Idh3bQ91VA7 384 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Zbed6D2EAC2 980 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vmn2r63E9Q0K5 859 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Gm9268E9Q0M3 861 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Vmn2r62K7N712 859 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 ClockO08785 855 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Clk2O35491 499 aa9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Drg1P32233 367 aaKnown RBP9.6□□□□□ -0.87
Prpf40a-201ENSMUST00000076313 Rexo4Q6PAQ4 432 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms