RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Phactr3Q8BYK5 558 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Slfn5Q8CBA2 884 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Inpp5fQ8CDA1 1132 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Taco1Q8K0Z7 294 aaKnown RBP11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Fcho1Q8K285 873 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Slc25a3Q8VEM8 357 aaKnown RBP11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Rin1Q921Q7 763 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Unc45aQ99KD5 944 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pex6Q99LC9 981 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Golga1Q9CW79 758 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Ndufaf7Q9CWG8 436 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Chordc1Q9D1P4 331 aaKnown RBP11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Paip2Q9D6V8 124 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 MrgbpQ9DAT2 204 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Rassf7Q9DD19 359 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Trhr2Q9ERT2 382 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Oxct2bQ9ESL0 520 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Oxct2aQ9JJN4 520 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Bace2Q9JL18 514 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 PtprfA2A8L5 1898 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Plin4O88492 1403 aa11.7□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Gm15262A0A140LIQ5 728 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pex10B1AUE5 324 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Trim12cD3Z3L3 497 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Kcng2F7A6P6 480 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Calhm3J3QMI4 347 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Dpysl2O08553 572 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Tnfrsf11bO08712 401 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Anxa8O35640 327 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pde6bP23440 856 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pms2P54279 859 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Slc26a1P58735 704 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Rab6bP61294 208 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Shox2P70390 331 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Mcm9Q2KHI9 1134 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Fbxw11Q5SRY7 542 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Arhgap44Q5SSM3 814 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Inpp4bQ6P1Y8 924 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Ccdc154Q6RUT8 657 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Olfr1057Q7TR75 315 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pdk1Q8BFP9 434 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 AarsQ8BGQ7 968 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Slc7a4Q8BLQ7 635 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 RbakQ8BQC8 711 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Wdr59Q8C0M0 992 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Spdye4bQ8CDE8 236 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 D8Ertd738eQ8R1F0 94 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Slc35f5Q8R314 524 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Sec63Q8VHE0 760 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 GzmnQ920S1 248 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Cog2Q921L5 731 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Abcf2Q99LE6 628 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 PmpcbQ9CXT8 489 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Vmn1r65Q9EPS7 332 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Gm43951A0A0N4SUT6 962 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Xpnpep3B7ZMP1 506 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Ces1bD3Z5G7 567 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Vmn2r11E9Q4X4 861 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pcsk6F6XJP7 959 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Gm11236J3QMS7 360 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Cacna2d1O08532 1103 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Oaz2O08608 189 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Dusp8O09112 663 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Ap1g2O88512 791 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 LgmnO89017 435 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pgk1P09411 417 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Rag1P15919 1040 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Mcpt4P21812 246 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Hoxd11P23813 323 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Gad2P48320 585 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pkn1P70268 946 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Hrh2P97292 397 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Cdk16Q04735 496 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 RnaselQ05921 735 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Tex35Q14BK3 207 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Znf746Q3U133 652 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Smcr8Q3UMB5 935 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Plcl1Q3USB7 1096 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Shroom1Q5SX79 823 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Sema3cQ62181 751 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Trim24Q64127 1051 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Tpp2Q64514 1262 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Wdr44Q6NVE8 915 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 ShbQ6PD21 503 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Rad9bQ6WBX7 403 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Uts2bQ765I1 113 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Ip6k2Q80V72 448 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Baiap2l2Q80Y61 522 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Ddx42Q810A7 929 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Eif2aQ8BJW6 581 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 4921504E06RikQ8CET2 560 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Rnf208Q8K0W3 265 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Colgalt1Q8K297 617 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 ItpkaQ8R071 459 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Itgbl1Q8VDV0 494 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Zfp617Q91WM0 559 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Pcdha1Q91Y21 948 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Fuca2Q99KR8 461 aa11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Ssu72Q9CY97 194 aaKnown RBP11.69□□□□□ -0.54
Vamp1-202ENSMUST00000063588 Rfc5Q9D0F6 339 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms