RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Ubn2Q80WC1 1314 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gucy2dA0A0U1RPR8 1117 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm3045A0A1D5RMA1 209 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cyp2t4E9PWV0 503 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 RbpjlO08674 515 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ephb2P54763 986 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cxcr5Q04683 374 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Arid5aQ3U108 590 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Rcsd1Q3UZA1 412 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Lin54Q571G4 749 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Dph1Q5NCQ5 438 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ccdc92bQ5SUE3 299 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Q5XFZ0 217 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 ScinQ60604 715 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Fpr-rs7Q71MR7 338 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Zik1Q80YP6 463 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Scara3Q8C850 606 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Klk15Q8CGR4 254 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Fyttd1Q91Z49 317 aaKnown RBP7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Mrps5Q99N87 432 aaKnown RBP7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 GarsQ9CZD3 729 aaKnown RBP7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Sgf29Q9DA08 293 aaKnown RBP7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Fhl3Q9R059 289 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Bub1bQ9Z1S0 1052 aa7.86□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Exoc3l2D3YUP5 789 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm1110F6Y113 635 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 JtbO88824 146 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 CremP27699 357 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Epha3P29319 983 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cpeb1P70166 561 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Rasgrf2P70392 1189 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Trim63Q38HM4 350 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Stt3bQ3TDQ1 823 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 RetsatQ64FW2 609 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Vrk1Q80X41 440 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Rab39aQ8BHD0 217 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Iars2Q8BIJ6 1012 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Plekhs1Q8BW88 474 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Rbm34Q8C5L7 375 aaKnown RBP7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Wrap53Q8VC51 532 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Atxn3Q9CVD2 355 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ceacam13Q9DAT7 263 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Slc12a7Q9WVL3 1083 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Sema4fQ9Z123 777 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Arap2Q8BZ05 1703 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Col4a5Q63ZW6 1691 aa7.85□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ankrd50F7BE84 1390 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Plekhh1Q80TI1 1356 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ank1Q02357 1862 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Lilra6A0A0B4J1F3 663 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm21083A0A0G2JFD5 256 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm21149A0A0G2JFY7 255 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm42421F6X8D5 166 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Speer4cG3UXD1 256 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm17019K7N6W5 255 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Tuba3aP05214 450 aaKnown RBP7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Prkg1P0C605 671 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Lmnb2P21619 596 aaKnown RBP7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Bmp7P23359 430 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Fcgr1P26151 404 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Tgfb2P27090 414 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 PolgP54099 1218 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 AbatP61922 500 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 PrkcbP68404 671 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Runx2Q08775 607 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gbp8Q2V6D6 525 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ttyh2Q3TH73 532 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Zar1Q80SU3 361 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Gm9758Q80ZT2 255 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ipo5Q8BKC5 1097 aaKnown RBP7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Mettl24Q8CCB5 363 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Fam155aQ8CCS2 467 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Cd248Q91V98 765 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Rnf126Q91YL2 313 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Smc1bQ920F6 1248 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Usp16Q99LG0 825 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 MynnQ99MD8 610 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Vmn1r52Q9EP79 309 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Elf2Q9JHC9 593 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Atp1a4Q9WV27 1032 aa7.84□□□□□ -1.15
Ccdc54-201ENSMUST00000062439 Ttc21aQ8C0S4 1314 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm3893E9Q1I1 302 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Tnk2O54967 1055 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Fgl2P12804 432 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Drg1P32233 367 aaKnown RBP7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Bmpr1aP36895 532 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Yy1Q00899 414 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Hk3Q3TRM8 922 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Ubn1Q4G0F8 1135 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Vwc2lQ505H4 222 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Nxph1Q61200 271 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Tm4sf1Q64302 202 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Morc2aQ69ZX6 1030 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Usp49Q6P9L4 685 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Mindy1Q76LS9 468 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Ckap2lQ7TS74 745 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Wdr48Q8BH57 676 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Nuak2Q8BZN4 639 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Gm16503Q8C6M9 103 aa7.83□□□□□ -1.16
Ccdc54-201ENSMUST00000062439 Smoc2Q8CD91 447 aa7.83□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms