RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Fnip1Q68FD7 1165 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Zfyve28Q6ZPK7 905 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 TiprlQ8BH58 271 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ube2sQ921J4 223 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nme5Q99MH5 211 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rwdd4Q9CPR1 188 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Snx29Q9D3S3 818 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fam166bA2AIP0 273 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tlr8P58682 1032 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rftn2Q8CHX7 500 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Pgam1Q9DBJ1 254 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Btbd3P58545 530 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mfn1Q811U4 741 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ckap4Q8BMK4 575 aaKnown RBP16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Dpp3Q99KK7 738 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 RhouQ9EQT3 261 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm16440K7N6G6 218 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm8271L7N2E2 218 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Adam15O88839 864 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Aldh3a1P47739 453 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tmem154Q8C4Q9 181 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fam126bQ8C729 530 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 AagabQ8R2R3 316 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Guca1bQ8VBV8 201 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ergic3Q9CQE7 383 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Birc5O70201 140 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Atp9aO70228 1047 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Phkg1P07934 388 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Serpina6Q06770 397 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 SvopQ8BFT9 548 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Nlrp10Q8CCN1 673 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fam20bQ8VCS3 409 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Trex1Q91XB0 314 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Zbed5B2RPU8 756 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Pole2O54956 527 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ifi47Q61635 420 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Dusp19Q8K4T5 220 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tmem82Q8R115 356 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cdc16Q8R349 620 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 1700129C05RikQ9CQ77 218 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Adck1Q9D0L4 525 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Mpp6Q9JLB0 553 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Atp6v1g2Q9WTT4 118 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm14781A2A9Q9 366 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 H2-EaP01904 255 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 P04224 255 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Got1P05201 413 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 YwhaqP68254 245 aaKnown RBP16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Pld1Q9Z280 1074 aa16.99■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Dpf2Q61103 391 aaKnown RBP16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Amz1Q8BVF9 502 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Camk1dQ8BW96 385 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 RerglB2RVE2 204 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Trim63Q38HM4 350 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cdkn2aipQ8BI72 563 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Crtc3Q91X84 619 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sae1Q9R1T2 350 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tecpr2Q3UH45 1423 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cyp2c69E9PXC3 491 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sdc4O35988 198 aaKnown RBP16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Vmn2r1O70410 912 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Myo19Q5SV80 963 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Slc13a3Q91Y63 600 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Vmn2r25W4VSP2 855 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Vwa5b1A9Z1V5 1215 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 MyocO70624 490 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fgfr4Q03142 799 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 HadhQ61425 314 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 GaleQ8R059 347 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Hes6Q9JHE6 224 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Coro1cQ9WUM4 474 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 AspgA0JNU3 564 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Stk16O88697 305 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gm2163Q6PCY5 473 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gja6Q6S5G4 283 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Lrrc24Q8BHA1 521 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Zhx3Q8C0Q2 951 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ptdss1Q99LH2 473 aaKnown RBP16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sult2a7A0A1B0GRF0 313 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cyp4a12bA2A974 508 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Igfbp4P47879 254 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sephs2P97364 452 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ptchd3Q0EEE2 906 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Adgra1Q8C4G9 578 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Rab36Q8CAM5 267 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Cyp4a12aQ91WL5 508 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Myo5bP21271 1818 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Grm6Q5NCH9 871 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 CapslQ6P8Y1 208 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Eno4Q8C042 619 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Gsdmc3Q8CB12 480 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Tab1Q8CF89 502 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Colgalt1Q8K297 617 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ribc2Q9D4Q1 309 aa16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Khdrbs3Q9R226 346 aaKnown RBP16.98■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Ccdc163A2AGD7 326 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Fmr1P35922 614 aaKnown RBP16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Stk40Q7TNL3 435 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 3830417A13RikQ8BQJ2 303 aa16.97■□□□□ 0.31
Ccdc88a-201ENSMUST00000040182 Sgms1Q8VCQ6 419 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms