RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Zbtb11G5E8B9 1050 aaKnown RBP13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Clk2O35491 499 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 DcxO88809 366 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 AladP10518 330 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 BpgmP15327 259 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Grm1P97772 1199 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 HmgcrQ01237 887 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pyroxd1Q3TMV7 498 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Nemp1Q6ZQE4 437 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mcph1Q7TT79 822 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Trappc12Q8K2L8 797 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Arhgef3Q91X46 524 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 MutyhQ99P21 515 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Psmd9Q9CR00 222 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Fam136aQ9CR98 138 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ndc80Q9D0F1 642 aaKnown RBP13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Polr3hQ9D2C6 204 aaKnown RBP13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Actrt2Q9D9L5 377 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Serpinb9bQ9DAV6 377 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Scyl3Q9DBQ7 735 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Tnfsf13bQ9WU72 309 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Arhgef26D3YYY8 869 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 D3Z070 196 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pdia2D3Z6P0 527 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Atf6F6VAN0 656 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Gm3187M0QWW3 260 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Bub1O08901 1058 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mllt10O54826 1068 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pde4aO89084 844 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 UmpsP13439 481 aaKnown RBP13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pdss1Q33DR2 409 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Adrbk2Q3UYH7 688 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mthfd1lQ3V3R1 977 aaKnown RBP13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Sort1Q6PHU5 825 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Clec4b1Q7TS58 209 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pgm5Q8BZF8 567 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Trim35Q8C006 501 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 NaprtQ8CC86 538 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mamdc2Q8CG85 686 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 CopaQ8CIE6 1224 aaKnown RBP13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Gbp7Q91Z40 638 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Def8Q99J78 448 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ccdc130Q9D516 385 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Tbx20Q9ES03 445 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 TfgQ9Z1A1 397 aa13.85□□□□□ -0.19
Nup88-201ENSMUST00000035283 Osbpl8B9EJ86 889 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 MafP54843 370 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pla2g6P97819 807 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 ADGRF3Q58Y75 991 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Aldh1a2Q62148 518 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 PigaQ64323 485 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Atg9bQ6EBV9 922 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Cdkn3Q810P3 211 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Slc36a3Q811P0 477 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Slc9a4Q8BUE1 797 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Znf467Q8JZL0 594 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 DnerQ8JZM4 737 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Tmem82Q8R115 356 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Vmn1r213Q8R278 384 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Sh3kbp1Q8R550 709 aaKnown RBP13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ugp2Q91ZJ5 508 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ndufaf1Q9CWX2 328 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Prorsd1Q9D820 169 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Stap1Q9JM90 297 aaKnown RBP13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Rasgrp2Q9QUG9 608 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Dach1Q9QYB2 751 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ly6iQ9WU67 134 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Zfp946F6VWU8 523 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Efna5O08543 228 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 FaahO08914 579 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 SpibO35906 267 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Syngr1O55100 234 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Akap10O88845 662 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Gjb3P28231 270 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Tac1P41539 130 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Psma2P49722 234 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 MipP51180 263 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ccr1P51675 355 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 ClgnP52194 611 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mmp20P57748 482 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Atxn7l3bQ3UD01 97 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 1810049J17RikQ3V2G9 153 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 PrkciQ62074 595 aaKnown RBP13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Acot5Q6Q2Z6 421 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Kirrel2Q7TSU7 700 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Gramd1bQ80TI0 738 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Mettl21cQ8BLU2 248 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Osbpl6Q8BXR9 959 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 ItchQ8C863 864 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Snrnp25Q8VIK1 123 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Pcdhb18Q91Y02 792 aa13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 NonoQ99K48 473 aaKnown RBP13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Sf3b1Q99NB9 1304 aaKnown RBP13.84□□□□□ -0.19
Nup88-201ENSMUST00000035283 Ttc30a2A2AKQ8 664 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 EsrraO08580 422 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 LynP25911 512 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Samd11Q1RNF8 542 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Slc38a5Q3U1J0 479 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 McuQ3UMR5 350 aa13.83□□□□□ -0.2
Nup88-201ENSMUST00000035283 Gm11437Q5QR91 290 aa13.83□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms