RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Mea1Q64327 174 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Hmgb4Q6P8W9 181 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rad9bQ6WBX7 403 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Baiap2l2Q80Y61 522 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Q80Y73 168 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Trmt13Q8BYH3 481 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Slc9a9Q8BZ00 644 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Otud7aQ8R554 926 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Angel1Q8VCU0 667 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Sntg2Q925E0 539 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ddit4Q9D3F7 229 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 LactbQ9EP89 551 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Sned1Q70E20 1403 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Smchd1Q6P5D8 2007 aaKnown RBP11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rnf19bA2A7Q9 732 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rpl21O09167 160 aaKnown RBP11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 AgxtO35423 414 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Banf1O54962 89 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 IkbkgO88522 412 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Vav1P27870 845 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Vps51Q3UVL4 782 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ampd1Q3V1D3 745 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Srek1ip1Q4V9W2 153 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cyp2c66Q5GLZ0 490 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Heatr9Q5QNV8 569 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Caprin1Q60865 707 aaKnown RBP11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Iars2Q8BIJ6 1012 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Olfr809Q8VEX8 328 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Paip2bQ91W45 136 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Mtif2Q91YJ5 727 aaKnown RBP11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Usp26Q99MX1 835 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ubxn11Q9D572 484 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 RecqlQ9Z129 648 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dhx35A2ACQ1 703 aaKnown RBP11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Eno3P21550 434 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 GlrbP48168 496 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Krt26Q3TRJ4 462 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Trim38Q5SZ99 471 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 CapslQ6P8Y1 208 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Zswim6Q80TB7 1207 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Klhl38Q8BSF5 581 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Adamts2Q8C9W3 1213 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Kctd15Q8K0E1 283 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Defb19Q8K3I8 83 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nudcd3Q8R1N4 363 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Itm2cQ91VK4 269 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Fubp1Q91WJ8 651 aaKnown RBP11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pcdhga10Q91XY9 930 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Pcdhb1Q91Y08 818 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Mfsd5Q921Y4 450 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rin2Q9D684 903 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Trpc7Q9WVC5 862 aa11.19□□□□□ -0.62
Msh3-201ENSMUST00000022220 Morc3F7BJB9 942 aaKnown RBP11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Anxa8O35640 327 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 StrnO55106 780 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Grpel2O88396 224 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Faf1P54731 649 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Sash1P59808 1230 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Il1rapl1P59823 695 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Spryd7Q3TFQ1 196 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ccndbp1Q3TVC7 356 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 FAM120AQ6A0A9 1112 aaKnown RBP11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Q8BGC1 442 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Atg16l1Q8C0J2 607 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Sept11Q8C1B7 431 aaKnown RBP11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Hars2Q99KK9 505 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Utp11Q9CZJ1 253 aaKnown RBP11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tlr6Q9EPW9 795 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Neu2Q9JMH3 379 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Dhtkd1A2ATU0 921 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Arhgef26D3YYY8 869 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Raph1F2Z3U3 1266 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Lrrc10bG3XA50 292 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm3383J3QQ59 259 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm3164L7N2B9 238 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Gm3239L7N2D9 227 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Wnt7bP28047 349 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Casp7P97864 303 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Arid5aQ3U108 590 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Snx27Q3UHD6 539 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Q3UK37 420 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Myo1gQ5SUA5 1024 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 DstykQ6XUX1 927 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Tdpoz3Q717B4 365 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Uts2bQ765I1 113 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ric8bQ80XE1 520 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Kcnv1Q8BZN2 503 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Rtp1Q8C8C1 263 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Fam114a2Q8VE88 497 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 CarfQ8VHI4 689 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Nt5c3aQ9D020 331 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Clec4aQ9QZ15 238 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Fam81bA0A140LI28 432 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Ism1A2ATD1 454 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Clk2O35491 499 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Birc5O70201 140 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 ChpfQ6IQX7 774 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Cyp2c54Q6XVG2 490 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Stx18Q8VDS8 334 aa11.18□□□□□ -0.62
Msh3-201ENSMUST00000022220 Snx29Q9D3S3 818 aa11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms