RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ago3Q8CJF9 860 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Ube2q2Q8K2Z8 378 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 FktnQ8R507 461 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Pcdhac2Q91Y09 1006 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Necab2Q91ZP9 389 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 4933428M09RikQ9D3X3 192 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Gstt4Q9D4P7 240 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Top3bQ9Z321 862 aaKnown RBP16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Serpini1O35684 410 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Gigyf2Q6Y7W8 1291 aaKnown RBP16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Zfp759Q7M6X3 721 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Fbxo33Q8VE08 562 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 TtpalQ9D3D0 343 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Tmem59Q9QY73 323 aa16.95■□□□□ 0.3
Shh-201ENSMUST00000002708 Zbed6D2EAC2 980 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Top6blJ3QMY9 579 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Edil3O35474 480 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Fen1P39749 378 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Hif1aQ61221 836 aaKnown RBP16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Ahcyl1Q80SW1 530 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Ubap2lQ80X50 1107 aaKnown RBP16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 MutyhQ99P21 515 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Serpina3iD3Z450 408 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Ebf3O08791 596 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Tnk2O54967 1055 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Cyp2a4P15392 494 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Cyp2a5P20852 494 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Oas1fQ14AZ4 364 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Als2clQ60I26 952 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Tmem130Q6NXM3 419 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Kctd12Q6WVG3 327 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Fam107aQ78TU8 144 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 TdrkhQ80VL1 560 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Lrrc27Q80YS5 523 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Pi4kbQ8BKC8 816 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Spag16Q8K450 639 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Slc35f5Q8R314 524 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Zmat2Q9CPW7 199 aa16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Decr1Q9CQ62 335 aaKnown RBP16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 MtrexQ9CZU3 1040 aaKnown RBP16.94■□□□□ 0.3
Shh-201ENSMUST00000002708 Ep400Q8CHI8 3072 aaKnown RBP16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Itgb3O54890 787 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Pex2P55098 305 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Mrgprx2Q3UG50 352 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Icam5Q60625 917 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 BoraQ8BS90 525 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Olfr784Q8VFZ9 319 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Ubap2Q91VX2 1132 aaKnown RBP16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Trim7Q923T7 510 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Tubgcp4Q9D4F8 667 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Rnf138rt1Q9D9M9 248 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Zfp105G3X9I0 524 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Foxm1O08696 760 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Trdmt1O55055 415 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 LgmnO89017 435 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 En1P09065 401 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 ItgalP24063 1163 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Marveld2Q3UZP0 555 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 1810049J17RikQ3V2G9 153 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Papss1Q60967 624 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Angel2Q8K1C0 544 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Myoz3Q8R4E4 245 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Itgbl1Q8VDV0 494 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Ecrg4Q99LS0 148 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 PompQ9CQT5 141 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 PolhQ9JJN0 694 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Rtl9Q32KG4 1339 aa16.93■□□□□ 0.3
Shh-201ENSMUST00000002708 Tfap2aP34056 437 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Snx25Q3ZT31 840 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Etaa1Q5SVT3 877 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Slc26a2Q62273 739 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Wscd1Q80XH4 572 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Anapc5Q8BTZ4 740 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Gga1Q8R0H9 635 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 PlvapQ91VC4 438 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Traf7Q922B6 594 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Zfp64Q99KE8 643 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 AadacQ99PG0 398 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Nde1Q9CZA6 344 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 4930513O06RikQ9D549 161 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Fam3aQ9D8T0 230 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Slc4a11A2AJN7 862 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Gm1141B9EJU1 475 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Ptar1E9QAB6 424 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Atf6F6VAN0 656 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Il6stQ00560 917 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 PrkcqQ02111 707 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Sox8Q04886 464 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Scube3Q66PY1 993 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Scaf4Q6PFF0 1209 aaKnown RBP16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Nemp1Q6ZQE4 437 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Mrgprb8Q7TN51 330 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Fam49aQ8BHZ0 323 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Nat14Q8BVG8 206 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 TdrpQ8C5P7 182 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Actr3Q99JY9 418 aaKnown RBP16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Chst12Q99LL3 419 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Cox16Q9CR63 106 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Mettl7bQ9DD20 244 aa16.92■□□□□ 0.3
Shh-201ENSMUST00000002708 Krt27Q9Z320 448 aa16.92■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms