RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 SLC12A8A0AV02 714 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 KCNJ18B7U540 433 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 HRO43593 1189 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 PENKP01210 267 aaPredicted RBP18.51■□□□□ 0.55
PTPN11-207ENST00000639857 HARS2P49590 506 aaKnown RBP18.51■□□□□ 0.55
PTPN11-207ENST00000639857 RGS7P49802 495 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 DGKEP52429 567 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 KDSRQ06136 332 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 KCNJ12Q14500 433 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 C2orf27AQ580R0 203 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 EOGTQ5NDL2 527 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 BEND5Q7L4P6 421 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 HHIPQ96QV1 700 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 IRX2Q9BZI1 471 aaPredicted RBP18.51■□□□□ 0.55
PTPN11-207ENST00000639857 DNAJC17Q9NVM6 304 aaKnown RBP18.51■□□□□ 0.55
PTPN11-207ENST00000639857 STARD13Q9Y3M8 1113 aa18.51■□□□□ 0.55
PTPN11-207ENST00000639857 TBC1D3BA6NDS4 549 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 BECN2A8MW95 431 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 AXIN1O15169 862 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 THAP12O43422 761 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 LRP3O75074 770 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 RPP40O75818 363 aaKnown RBP18.5■□□□□ 0.55
PTPN11-207ENST00000639857 GABBR2O75899 941 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
PTPN11-207ENST00000639857 LTFP02788 710 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 SEC13P55735 322 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 MESP2Q0VG99 397 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 CRY1Q16526 586 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 TCP11X2Q5H9J9 407 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 GJB7Q6PEY0 223 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 PRR23BQ6ZRT6 265 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 TPGS1Q6ZTW0 290 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 RASSF3Q86WH2 238 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 FMNL3Q8IVF7 1028 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 NAT16Q8N8M0 369 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 IL17RCQ8NAC3 791 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 TSTD1Q8NFU3 115 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 NDRG1Q92597 394 aaKnown RBP18.5■□□□□ 0.55
PTPN11-207ENST00000639857 SIX2Q9NPC8 291 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 STOML2Q9UJZ1 356 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 FBXO10Q9UK96 956 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 AGO1Q9UL18 857 aaKnown RBP18.5■□□□□ 0.55
PTPN11-207ENST00000639857 PCDHGC3Q9UN70 934 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 SLC27A6Q9Y2P4 619 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 NFE2L3Q9Y4A8 694 aa18.5■□□□□ 0.55
PTPN11-207ENST00000639857 CYBBP04839 570 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 RETP07949 1114 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 DGKGP49619 791 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 PTK2Q05397 1052 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 RING1Q06587 406 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 NNTQ13423 1086 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 ARHGAP44Q17R89 818 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 C10orf76Q5T2E6 689 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 CEP68Q76N32 757 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 C11orf74Q86VG3 221 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 DENND1CQ8IV53 801 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 EDEM1Q92611 657 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 LOXL4Q96JB6 756 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 SLC4A5Q9BY07 1137 aa18.49■□□□□ 0.55
PTPN11-207ENST00000639857 ALDH1A2O94788 518 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 KLF8O95600 359 aaPredicted RBP18.48■□□□□ 0.55
PTPN11-207ENST00000639857 CALCAP01258 141 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 IGLV3-27P01718 113 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 HMBSP08397 361 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 TIE1P35590 1138 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 E2F5Q15329 346 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 FYB2Q5VWT5 728 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 NUGGCQ68CJ6 796 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 DENND1BQ6P3S1 775 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 SASS6Q6UVJ0 657 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.48■□□□□ 0.55
PTPN11-207ENST00000639857 TMEM110Q86TL2 294 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 SFTPA1Q8IWL2 248 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 ALLCQ8N6M5 410 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 ZNF513Q8N8E2 541 aaPredicted RBP18.48■□□□□ 0.55
PTPN11-207ENST00000639857 TXNDC5Q8NBS9 432 aaKnown RBP18.48■□□□□ 0.55
PTPN11-207ENST00000639857 SLC2A11Q9BYW1 496 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 LHX5Q9H2C1 402 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 POLMQ9NP87 494 aaPredicted RBP18.48■□□□□ 0.55
PTPN11-207ENST00000639857 ST7Q9NRC1 585 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 SAMSN1Q9NSI8 373 aaKnown RBP18.48■□□□□ 0.55
PTPN11-207ENST00000639857 ANO10Q9NW15 660 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 DNAJC12Q9UKB3 198 aa18.48■□□□□ 0.55
PTPN11-207ENST00000639857 FOXD2O60548 495 aaPredicted RBP18.47■□□□□ 0.55
PTPN11-207ENST00000639857 TPM2P07951 284 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 USP8P40818 1118 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 BPIFB4P59827 614 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 SRSF5Q13243 272 aaKnown RBP18.47■□□□□ 0.55
PTPN11-207ENST00000639857 PDCLQ13371 301 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 STX1AQ16623 288 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 CCDC183Q5T5S1 534 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 CDKAL1Q5VV42 579 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 UNC45BQ8IWX7 931 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 CCDC33Q8N5R6 958 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 AZIN2Q96A70 460 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 ZC3H10Q96K80 434 aaKnown RBP18.47■□□□□ 0.55
PTPN11-207ENST00000639857 SERPINB11Q96P15 392 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 NOX5Q96PH1 765 aa18.47■□□□□ 0.55
PTPN11-207ENST00000639857 SFMBT1Q9UHJ3 866 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms