RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 JAG2Q9Y219 1238 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 DNM1LO00429 736 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 AKR1D1P51857 326 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 NKX2-5P52952 324 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 P2RX3P56373 397 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 C1orf141Q5JVX7 400 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 MPRIPQ6WCQ1 1025 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 UBE3BQ7Z3V4 1068 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ADAD1Q96M93 576 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TRNT1Q96Q11 434 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 QRSL1Q9H0R6 528 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 C17orf75Q9HAS0 396 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 RC3H2Q9HBD1 1191 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 PCDH10Q9P2E7 1040 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 PCDHA12Q9UN75 941 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 MRPS7Q9Y2R9 242 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 FRMPD2Q68DX3 1309 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 MASP2O00187 686 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 KPNA4O00629 521 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 GREM1O60565 184 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 FAM13AO94988 1023 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 RAB3DO95716 219 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 NR1D1P20393 614 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 HTR7P34969 479 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 GGCXP38435 758 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 CDK7P50613 346 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 SCARB2Q14108 478 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 EFR3AQ14156 821 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 AKAP4Q5JQC9 854 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ZDHHC17Q8IUH5 632 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 TRPV3Q8NET8 790 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 PXYLP1Q8TE99 480 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ZYG11BQ9C0D3 744 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 NSMCE4AQ9NXX6 385 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ADAMTS1Q9UHI8 967 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 MAD2L2Q9UI95 211 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 RPH3AQ9Y2J0 694 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 GRIN2DO15399 1336 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 CCDC18Q5T9S5 1454 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 TTC26A0AVF1 554 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 CHURC1-FNTBB4DL54 471 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 SLC9A3R1O14745 358 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 TSPAN4O14817 238 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 N4BP1O75113 896 aaKnown RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 PGRP06401 933 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 STAG3L3P0CL85 134 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 STAT5AP42229 794 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 HIRAP54198 1017 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 AP1S2P56377 157 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 TP53BP2Q13625 1128 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ANO7Q6IWH7 933 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 DEGS2Q6QHC5 323 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 DPPA2Q7Z7J5 298 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 UBLCP1Q8WVY7 318 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ZSCAN31Q96LW9 406 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 NUP62CLQ9H1M0 184 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 CNOT10Q9H9A5 744 aaKnown RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 RNPEPL1Q9HAU8 725 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 NFE2L3Q9Y4A8 694 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ARHGEF35A5YM69 484 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 OR6C70A6NIJ9 312 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 H7C0S8 307 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 DENRO43583 198 aaKnown RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 EFCAB14O75071 495 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 LARGE1O95461 756 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 CCNA2P20248 432 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 CLK3P49761 638 aaKnown RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 TSTA3Q13630 321 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 AANATQ16613 207 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF362Q5T0B9 420 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 SPOPLQ6IQ16 392 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 TTC6Q86TZ1 520 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 TCP11L2Q8N4U5 519 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 SNX31Q8N9S9 440 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 LINS1Q8NG48 757 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 DDX54Q8TDD1 881 aaKnown RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 SYTL5Q8TDW5 730 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 RPS6KA6Q9UK32 745 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 MAP3K1Q13233 1512 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 DCDC2CA8MYV0 355 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ALX3O95076 343 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 IGFBP1P08833 259 aaPredicted RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 MLNP12872 115 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 TNNI3P19429 210 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 S100PP25815 95 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 NEK4P51957 841 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 DLG4P78352 724 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 OCRLQ01968 901 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 GLO1Q04760 184 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 CKAP4Q07065 602 aaKnown RBP4.43□□□□□ -1.7
SCN3A-209ENST00000639244 KCNAB1Q14722 419 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 NPTX1Q15818 432 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 CHRNA6Q15825 494 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 WDR93Q6P2C0 686 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ILDR2Q71H61 639 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 GMCL1P1Q8NEA9 526 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 ADAMTS19Q8TE59 1207 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 BORCS5Q969J3 196 aa4.43□□□□□ -1.7
SCN3A-209ENST00000639244 FAR2Q96K12 515 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms