RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 PLPP4Q5VZY2 271 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 C8orf74Q6P047 294 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 LLGL2Q6P1M3 1020 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 LRRC31Q6UY01 552 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 SYDE1Q6ZW31 735 aaPredicted RBP10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 DDX42Q86XP3 938 aaKnown RBP eCLIP10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 SLC13A5Q86YT5 568 aaPredicted RBP10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 SPATA4Q8NEY3 305 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 CLEC4CQ8WTT0 213 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 COG1Q8WTW3 980 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 HSPH1Q92598 858 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 HAPLN3Q96S86 360 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 VN1R3Q9BXE9 311 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 CALN1Q9BXU9 219 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 RHOBTB2Q9BYZ6 727 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 OSBPL8Q9BZF1 889 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 RAB17Q9H0T7 212 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 GOLPH3Q9H4A6 298 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 ALG13Q9NP73 1137 aaKnown RBP10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 ZDHHC7Q9NXF8 308 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 PCSK1NQ9UHG2 260 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 DNMT3LQ9UJW3 386 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 FBXW11Q9UKB1 542 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 AP4E1Q9UPM8 1137 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 HBS1LQ9Y450 684 aaKnown RBP10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 RAD54BQ9Y620 910 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 MYO16Q9Y6X6 1858 aa10.55□□□□□ -0.72
FOXCUT-201ENST00000628509 TMEM265A0A087WTH1 108 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 A0A1W2PQH9 124 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 FSCN2O14926 492 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 NCAM2O15394 837 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 IRAK2O43187 625 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 TGM5O43548 720 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 SRGAP2O75044 1071 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 ERLIN1O75477 346 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 GJB6O95452 261 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 C8AP07357 584 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 LINC00271P0C7V0 271 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 RARAP10276 462 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 RARGP13631 454 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 TGM2P21980 687 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 KDELR1P24390 212 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 HCAR3P49019 387 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 NR2C2P49116 596 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 SLC11A2P49281 568 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 FNTAP49354 379 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 HARS2P49590 506 aaKnown RBP10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 RABGGTBP53611 331 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 HDAC4P56524 1084 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 OGDHQ02218 1023 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 SLC25A11Q02978 314 aaKnown RBP10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 ZNF252P-AS1Q0IIN9 211 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 DPYSL2Q16555 572 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 C15orf59Q2T9L4 293 aaPredicted RBP10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 MAP9Q49MG5 647 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 C10orf120Q5SQS8 335 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 C9orf50Q5SZB4 431 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 RSPO2Q6UXX9 243 aaPredicted RBP10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 SPOCD1Q6ZMY3 1216 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 GPRIN1Q7Z2K8 1008 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 RFX6Q8HWS3 928 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 MMGT1Q8N4V1 131 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 GPR161Q8N6U8 529 aaKnown RBP10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 PDCD7Q8N8D1 485 aaKnown RBP10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 SCAMP5Q8TAC9 235 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 GIPC2Q8TF65 315 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 ALG3Q92685 438 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 KRT35Q92764 455 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 C17orf80Q9BSJ5 609 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 TRIM7Q9C029 511 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 DCLK3Q9C098 648 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 DHX35Q9H5Z1 703 aaKnown RBP10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 CATSPERBQ9H7T0 1116 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 ASAH2Q9NR71 780 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 DZANK1Q9NVP4 752 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 HAUS2Q9NVX0 235 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 MARCH2Q9P0N8 246 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 NAALADL1Q9UQQ1 740 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 ZNF510Q9Y2H8 683 aa10.54□□□□□ -0.72
FOXCUT-201ENST00000628509 CEP350Q5VT06 3117 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 PLXNA3P51805 1871 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 CENPFP49454 3210 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 TARSL2A2RTX5 802 aaKnown RBP10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 TYW5A2RUC4 315 aaKnown RBP10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 LCHNA4D1U4 455 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 CFAP69A5D8W1 941 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 FAM187AA6NFU0 413 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 APOL1O14791 398 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 FGF10O15520 208 aaPredicted RBP10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 TLR5O60602 858 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 PHF2O75151 1096 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 ZMYND10O75800 440 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 PYGMP11217 842 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 PTPN2P17706 415 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 ATF6P18850 670 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 GTF2F1P35269 517 aaKnown RBP eCLIP10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 ADRA1BP35368 520 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 CXCR3P49682 368 aa10.53□□□□□ -0.72
FOXCUT-201ENST00000628509 TBX4P57082 545 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms