RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SLC4A5Q9BY07 1137 aa23.37■■□□□ 1.33
SF1-220ENST00000626028 IRX2Q9BZI1 471 aaPredicted RBP23.37■■□□□ 1.33
SF1-220ENST00000626028 EBF1Q9UH73 591 aa23.37■■□□□ 1.33
SF1-220ENST00000626028 DNAJC12Q9UKB3 198 aa23.37■■□□□ 1.33
SF1-220ENST00000626028 RAB23Q9ULC3 237 aa23.37■■□□□ 1.33
SF1-220ENST00000626028 PCDHGC3Q9UN70 934 aa23.37■■□□□ 1.33
SF1-220ENST00000626028 PLXND1Q9Y4D7 1925 aa23.37■■□□□ 1.33
SF1-220ENST00000626028 SLC12A8A0AV02 714 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 FNTBP49356 437 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 RGS7P49802 495 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 DMC1Q14565 340 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 GJB7Q6PEY0 223 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 TRMT11Q7Z4G4 463 aaKnown RBP23.36■■□□□ 1.33
SF1-220ENST00000626028 TERB1Q8NA31 727 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 LHX5Q9H2C1 402 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 STOML2Q9UJZ1 356 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 AGO1Q9UL18 857 aaKnown RBP23.36■■□□□ 1.33
SF1-220ENST00000626028 MMP17Q9ULZ9 603 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 SMG5Q9UPR3 1016 aaKnown RBP23.36■■□□□ 1.33
SF1-220ENST00000626028 STARD13Q9Y3M8 1113 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 DAAM1Q9Y4D1 1078 aa23.36■■□□□ 1.33
SF1-220ENST00000626028 NEDD8-MDP1E9PL57 170 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 APBB3O95704 486 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 USP8P40818 1118 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 KIR2DL1P43626 348 aaPredicted RBP23.35■■□□□ 1.33
SF1-220ENST00000626028 SNX16P57768 344 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 RING1Q06587 406 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 NNTQ13423 1086 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 FMNL3Q8IVF7 1028 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 FAM71AQ8IYT1 594 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 GPR161Q8N6U8 529 aaKnown RBP23.35■■□□□ 1.33
SF1-220ENST00000626028 NDRG1Q92597 394 aaKnown RBP23.35■■□□□ 1.33
SF1-220ENST00000626028 PLCB1Q9NQ66 1216 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 FBXO10Q9UK96 956 aa23.35■■□□□ 1.33
SF1-220ENST00000626028 TBC1D3BA6NDS4 549 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 PENKP01210 267 aaPredicted RBP23.34■■□□□ 1.33
SF1-220ENST00000626028 CYBBP04839 570 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 DGKEP52429 567 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 MYL5Q02045 173 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 E2F5Q15329 346 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 C2orf27AQ580R0 203 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 HSP90AA4PQ58FG1 418 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 LAIR1Q6GTX8 287 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 GRAMD4Q6IC98 578 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 DPY19L2P1Q6NXN4 242 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 DENND1BQ6P3S1 775 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 DENND1CQ8IV53 801 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 UNC45BQ8IWX7 931 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 ANKRD20A12PQ8NF67 263 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 EDEM1Q92611 657 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 NOX5Q96PH1 765 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 ST7Q9NRC1 585 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 DNAJC17Q9NVM6 304 aaKnown RBP23.34■■□□□ 1.33
SF1-220ENST00000626028 GPR179Q6PRD1 2367 aa23.34■■□□□ 1.33
SF1-220ENST00000626028 FOXN3O00409 490 aaPredicted RBP23.33■■□□□ 1.33
SF1-220ENST00000626028 PES1O00541 588 aaKnown RBP23.33■■□□□ 1.33
SF1-220ENST00000626028 CALCAP01258 141 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 IGLV3-27P01718 113 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 CHRM1P11229 460 aaPredicted RBP23.33■■□□□ 1.33
SF1-220ENST00000626028 DMWDQ09019 674 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 KCNMA1Q12791 1236 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 EOGTQ5NDL2 527 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 KLHDC7AQ5VTJ3 777 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 NUGGCQ68CJ6 796 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 HEATR6Q6AI08 1181 aaKnown RBP23.33■■□□□ 1.33
SF1-220ENST00000626028 TPGS1Q6ZTW0 290 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 SCUBE3Q8IX30 993 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 NAT16Q8N8M0 369 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 AZIN2Q96A70 460 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 SLC2A11Q9BYW1 496 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 SLC27A6Q9Y2P4 619 aa23.33■■□□□ 1.33
SF1-220ENST00000626028 HRO43593 1189 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 GLI1P08151 1106 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 HMBSP08397 361 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 KRT9P35527 623 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 DGKGP49619 791 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 APBA1Q02410 837 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 KDSRQ06136 332 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 MESP2Q0VG99 397 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 PDCLQ13371 301 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 SIM2Q14190 667 aaPredicted RBP23.32■■□□□ 1.32
SF1-220ENST00000626028 CRY1Q16526 586 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 IL17RCQ8NAC3 791 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 GAB3Q8WWW8 586 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 MIS12Q9H081 205 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 NAT10Q9H0A0 1025 aaKnown RBP23.32■■□□□ 1.32
SF1-220ENST00000626028 FANCLQ9NW38 375 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 SFMBT1Q9UHJ3 866 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 CEP83Q9Y592 693 aa23.32■■□□□ 1.32
SF1-220ENST00000626028 NPC1O15118 1278 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 AXIN1O15169 862 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 NCAM1P13591 858 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 UCHL3P15374 230 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 CLCN1P35523 988 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 SEC13P55735 322 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 KRT31Q15323 416 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 FKBP15Q5T1M5 1219 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 ADGRF1Q5T601 910 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 FYB2Q5VWT5 728 aa23.31■■□□□ 1.32
SF1-220ENST00000626028 RASSF3Q86WH2 238 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms