RNA–Protein interactions for RNA: ENST00000625943.1

SNORD38B-202, Transcript of small nucleolar RNA, C/D box 38B, humanhuman

BASIC

Gene SNORD38B, Length 69 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD38B-202ENST00000625943 MAFFQ9ULX9 164 aa1.31□□□□□ -2.2
SNORD38B-202ENST00000625943 SPATA31A5Q5VU36 1347 aa1.31□□□□□ -2.2
SNORD38B-202ENST00000625943 SPATA31A7Q8IWB4 1347 aa1.31□□□□□ -2.2
SNORD38B-202ENST00000625943 A0A0G2JK05 382 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 IGLV5-39A0A0G2JS06 123 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 A0A1W2PPC1 479 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 SLC22A23A1A5C7 686 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 OR2W5A6NFC9 320 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 B4DGG1 531 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 PRR23D1E9PI22 279 aaPredicted RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 GOLIM4O00461 696 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 PRYO14603 147 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 TPP1O14773 563 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 AREL1O15033 823 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 INPPL1O15357 1258 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 MARCH6O60337 910 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 TULP3O75386 442 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 RNF8O76064 485 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 WDR47O94967 919 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 PRR23D2P0DMB1 279 aaPredicted RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 TMIGD3P0DMS9 266 aaPredicted RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 TMEM225BP0DP42 221 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 ARP10275 920 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 RPL17P18621 184 aaKnown RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 RPS6KB1P23443 525 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 DUSP1P28562 367 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 TACR3P29371 465 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 GALNSP34059 522 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 HOXD12P35452 270 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 PBX1P40424 430 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 CPA2P48052 419 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 SOX2P48431 317 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 CARSP49589 748 aaKnown RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 HTR6P50406 440 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 JAK3P52333 1124 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 EIF4A1P60842 406 aaKnown RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 CCDC15Q0P6D6 951 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 STK3Q13188 491 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 GBX1Q14549 363 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 GRM3Q14832 879 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 KPNB1Q14974 876 aaKnown RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 PLEKHG6Q3KR16 790 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 ASPHD1Q5U4P2 390 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 FAM90A2PQ658T7 463 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 MZT2AQ6P582 158 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 DARS2Q6PI48 645 aaKnown RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 COLCA1Q6ZS62 124 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 KIAA0408Q6ZU52 694 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 FAM57BQ71RH2 274 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 SRGAP1Q7Z6B7 1085 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 RFX6Q8HWS3 928 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 YAF2Q8IY57 180 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 FAM177A1Q8N128 213 aaPredicted RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 KRT78Q8N1N4 520 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 SDR16C5Q8N3Y7 309 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 NGDNQ8NEJ9 315 aaKnown RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 SPATA3Q8NHX4 192 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 MBD3L2Q8NHZ7 208 aaPredicted RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 PHKBQ93100 1093 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 GJA10Q969M2 543 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 TRMT61AQ96FX7 289 aaKnown RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 VPS50Q96JG6 964 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 SNX22Q96L94 193 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 HS6ST2Q96MM7 605 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 FCRL5Q96RD9 977 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 STRBPQ96SI9 672 aaKnown RBP1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 LRRC27Q9C0I9 530 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 NUAK2Q9H093 628 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 FAM234AQ9H0X4 552 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 USP29Q9HBJ7 922 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 ZNF287Q9HBT7 754 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 ABHD10Q9NUJ1 306 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 TMEM45AQ9NWC5 275 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 HDAC9Q9UKV0 1011 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 PCDHA12Q9UN75 941 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 HPSEQ9Y251 543 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 EID1Q9Y6B2 187 aa1.3□□□□□ -2.2
SNORD38B-202ENST00000625943 CLEC18AA5D8T8 446 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 C4orf47A7E2U8 309 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 H3BNX3 289 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 M0QZQ0 153 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 FOXN3O00409 490 aaPredicted RBP1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 SPTLC2O15270 562 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 DHHO43323 396 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 SLC28A2O43868 658 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 SNX2O60749 519 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 INMTO95050 263 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 NDUFB8O95169 186 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 IL18RAPO95256 599 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 SGPL1O95470 568 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 MAP4K4O95819 1239 aaPredicted RBP1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 SCGB1D2O95969 90 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 WNT1P04628 370 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 ANXA2P07355 339 aaKnown RBP1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 CD63P08962 238 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 HOXB2P14652 356 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 RBL1P28749 1068 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 ARRB2P32121 409 aa1.29□□□□□ -2.2
SNORD38B-202ENST00000625943 MTHFSP49914 203 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms