RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 FAM227AF5H4B4 570 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 RAB27BO00194 218 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 CTIFO43310 598 aaKnown RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 CA12O43570 354 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 USP12O75317 370 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 TXNP10599 105 aaKnown RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 IL1R1P14778 569 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 TPH1P17752 444 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 RPS6KB1P23443 525 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 ACVR2AP27037 513 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 NTSR1P30989 418 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 GALNSP34059 522 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 ALDH7A1P49419 539 aaKnown RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 RAB27AP51159 221 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 JAK3P52333 1124 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 ZXDBP98169 803 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 FMO1Q01740 532 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 CCDC15Q0P6D6 951 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 STK3Q13188 491 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 CNGA2Q16280 664 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 ZNF585BQ52M93 769 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 C3orf38Q5JPI3 329 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 MANEALQ5VSG8 457 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 PLAG1Q6DJT9 500 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 GRHL2Q6ISB3 625 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 CLEC9AQ6UXN8 241 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 ZNF793Q6ZN11 406 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 NR4A3Q92570 626 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 RUNDC1Q96C34 613 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 MSI2Q96DH6 328 aaKnown RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 PRR11Q96HE9 360 aaPredicted RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 TUBB6Q9BUF5 446 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 SELENOOQ9BVL4 669 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 CINPQ9BW66 212 aaPredicted RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 CDH19Q9H159 772 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 TYW1Q9NV66 732 aaKnown RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 DDX56Q9NY93 547 aaKnown RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 COL20A1Q9P218 1284 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 DNAJB11Q9UBS4 358 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 AFF4Q9UHB7 1163 aaKnown RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 HDAC9Q9UKV0 1011 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 TPCN1Q9ULQ1 816 aa3.5□□□□□ -1.85
TARDBP-220ENST00000618606 NOP58Q9Y2X3 529 aaKnown RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 SIRT4Q9Y6E7 314 aaPredicted RBP3.5□□□□□ -1.85
TARDBP-220ENST00000618606 SLC22A23A1A5C7 686 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 CFAP69A5D8W1 941 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 SERINC4A6NH21 518 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 PRSS47A8MTI9 375 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 SNX2O60749 519 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 ATG13O75143 517 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 NDUFB8O95169 186 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 TMIGD3P0DMS9 266 aaPredicted RBP3.49□□□□□ -1.85
TARDBP-220ENST00000618606 TMEM225BP0DP42 221 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 MYBP10242 640 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 ZKSCAN1P17029 563 aaPredicted RBP3.49□□□□□ -1.85
TARDBP-220ENST00000618606 HTR7P34969 479 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 IDUAP35475 653 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 PGGT1BP53609 377 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 SLC12A2P55011 1212 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 WDR5P61964 334 aaKnown RBP3.49□□□□□ -1.85
TARDBP-220ENST00000618606 MTAPQ13126 283 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 CNN3Q15417 329 aaKnown RBP3.49□□□□□ -1.85
TARDBP-220ENST00000618606 MZT2AQ6P582 158 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 RBM44Q6ZP01 1051 aaKnown RBP3.49□□□□□ -1.85
TARDBP-220ENST00000618606 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.49□□□□□ -1.85
TARDBP-220ENST00000618606 SLC44A5Q8NCS7 719 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 SMCR8Q8TEV9 937 aaPredicted RBP3.49□□□□□ -1.85
TARDBP-220ENST00000618606 ZNF479Q96JC4 524 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 MRPL44Q9H9J2 332 aaKnown RBP3.49□□□□□ -1.85
TARDBP-220ENST00000618606 DECR2Q9NUI1 292 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 ARL8BQ9NVJ2 186 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 MID2Q9UJV3 735 aa3.49□□□□□ -1.85
TARDBP-220ENST00000618606 LACTBL1A8MY62 500 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 SPTLC2O15270 562 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 INMTO95050 263 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 NGFRP08138 427 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 BRAFP15056 766 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 TBXAS1P24557 533 aaPredicted RBP3.48□□□□□ -1.85
TARDBP-220ENST00000618606 POLD2P49005 469 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 RPS16P62249 146 aaKnown RBP3.48□□□□□ -1.85
TARDBP-220ENST00000618606 KCNAB1Q14722 419 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 PRTGQ2VWP7 1150 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 RFX8Q6ZV50 586 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 YAF2Q8IY57 180 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 PIGKQ92643 395 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 GPATCH3Q96I76 525 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 FAM227BQ96M60 508 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 TMEM204Q9BSN7 226 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 ZCWPW1Q9H0M4 648 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 SAP30LQ9HAJ7 183 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 MSRB1Q9NZV6 116 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 COG5Q9UP83 839 aa3.48□□□□□ -1.85
TARDBP-220ENST00000618606 HEMK1Q9Y5R4 338 aaPredicted RBP3.48□□□□□ -1.85
TARDBP-220ENST00000618606 A0A0G2JK05 382 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 TMEM272A0A1B0GTI8 110 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 F8W810 466 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 PRPF4O43172 522 aaKnown RBP eCLIP3.47□□□□□ -1.85
TARDBP-220ENST00000618606 SYF2O95926 243 aaKnown RBP3.47□□□□□ -1.85
TARDBP-220ENST00000618606 HOXB2P14652 356 aa3.47□□□□□ -1.85
TARDBP-220ENST00000618606 IBSPP21815 317 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms