RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SOWAHAQ2M3V2 549 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 SLC45A4Q5BKX6 768 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 ARSHQ5FYA8 562 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 L1TD1Q5T7N2 865 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 ATG14Q6ZNE5 492 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 ZSCAN30Q86W11 494 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 C1orf127Q8N9H9 656 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 WDR48Q8TAF3 677 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 MMS19Q96T76 1030 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 GPR174Q9BXC1 333 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 DNAJC17Q9NVM6 304 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 GMIPQ9P107 970 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 DACH1Q9UI36 760 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 LSM7Q9UK45 103 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNCA-213ENST00000618500 EXOC7Q9UPT5 735 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 SETXQ7Z333 2677 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 A0A1W2PPC4 97 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 PRRT4C9JH25 899 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 E9PMD0 336 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 HNRNPDLO14979 420 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 SLC28A2O43868 658 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 TRAK2O60296 914 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 EIF5BO60841 1220 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 RNGTTO60942 597 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 TYRP14679 529 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 JUPP14923 745 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 YWHAQP27348 245 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 ATICP31939 592 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 MCM7P33993 719 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 TARDBPQ13148 414 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNCA-213ENST00000618500 ZNF211Q13398 564 aaPredicted RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 TAF1BQ53T94 588 aaPredicted RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 FYB2Q5VWT5 728 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 DHRS13Q6UX07 377 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 CENPQQ7L2Z9 268 aaPredicted RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 ANKS1BQ7Z6G8 1248 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 KCNE4Q8WWG9 221 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 HPS3Q969F9 1004 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 BICD1Q96G01 975 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 FBXO44Q9H4M3 255 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 OCEL1Q9H607 264 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 PARVGQ9HBI0 331 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 CLCA2Q9UQC9 943 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 SCML2Q9UQR0 700 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 DMTF1Q9Y222 760 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 CEP295Q9C0D2 2601 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 ENO4A6NNW6 628 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 IGHV4-34P06331 123 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 PLA2G4BP0C869 781 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 GAP43P17677 238 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 ADSSP30520 456 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 CD97P48960 835 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 MFAP3P55082 362 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 ENPEPQ07075 957 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 KIAA1324Q6UXG2 1013 aaKnown RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 BBS7Q8IWZ6 715 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 SIPA1Q96FS4 1042 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 RSPH9Q9H1X1 276 aaPredicted RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 PABPC3Q9H361 631 aaKnown RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 POLR1BQ9H9Y6 1135 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 NXF1Q9UBU9 619 aaKnown RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 SIX4Q9UIU6 781 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 ATXN7L1Q9ULK2 861 aaPredicted RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 K7ENM7 598 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 SEMA4FO95754 770 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 HARSP12081 509 aaKnown RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 CKMT1AP12532 417 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 CR2P20023 1033 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 POLR2BP30876 1174 aaKnown RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 MATR3P43243 847 aaKnown RBP eCLIP4.84□□□□□ -1.63
SNCA-213ENST00000618500 CDH8P55286 799 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 C21orf59P57076 290 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 RPS14P62263 151 aaKnown RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 TAF10Q12962 218 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 ARL13BQ3SXY8 428 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 SEZ6Q53EL9 994 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 KCNK18Q7Z418 384 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 TTC30AQ86WT1 665 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 TMEM25Q86YD3 366 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 WDR49Q8IV35 697 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 CHPFQ8IZ52 775 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 ERLEC1Q96DZ1 483 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 PCED1BQ96HM7 432 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 FAXDC2Q96IV6 333 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 EPAS1Q99814 870 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 ACE2Q9BYF1 805 aaPredicted RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 UBXN6Q9BZV1 441 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 KIAA1586Q9HCI6 787 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 OLFML3Q9NRN5 406 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 THSD1Q9NS62 852 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 PCDHGA7Q9Y5G6 932 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 HEMK1Q9Y5R4 338 aaPredicted RBP4.84□□□□□ -1.63
SNCA-213ENST00000618500 UBE4BO95155 1302 aa4.84□□□□□ -1.63
SNCA-213ENST00000618500 IGF2RP11717 2491 aa4.84□□□□□ -1.64
SNCA-213ENST00000618500 FRMD3A2A2Y4 597 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 LATO43561 262 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 MT-CO3P00414 261 aa4.83□□□□□ -1.64
SNCA-213ENST00000618500 ACADMP11310 421 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms