RNA–Protein interactions for RNA: ENST00000617556.4

CYFIP1-207, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene CYFIP1, Length 5,674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-207ENST00000617556 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
CYFIP1-207ENST00000617556 TRMT6Q9UJA5 497 aaKnown RBP12.64□□□□□ -0.39
CYFIP1-207ENST00000617556 F8VP50 259 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 RAMP2O60895 175 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 ARF4P18085 180 aaPredicted RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 KDELR1P24390 212 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 ARL2P36404 184 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 AARSP49588 968 aaKnown RBP eCLIP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 FLT3LGP49771 235 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 TUBP50607 506 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 DNAL1Q4LDG9 190 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 N4BP2L2Q92802 583 aaPredicted RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 WNT8BQ93098 351 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 ADGRE3Q9BY15 652 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 SENP6Q9GZR1 1112 aaPredicted RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 VIRMAQ69YN4 1812 aaKnown RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 SOAT2O75908 522 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 GJB1P08034 283 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 AMPD1P23109 780 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 CYP2C18P33260 490 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 HIC1Q14526 733 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 RRP1BQ14684 758 aaKnown RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 NBPF20Q3BBV1 942 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 NOMO2Q5JPE7 1267 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 IRF2BP2Q7Z5L9 587 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 ANKRD52Q8NB46 1076 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 GDF3Q9NR23 364 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 MARCOQ9UEW3 520 aaPredicted RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 SCOCQ9UIL1 159 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 PCDHGB4Q9UN71 923 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 E2F8A0AVK6 867 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 H0Y3Z8 333 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 B4GALT4O60513 344 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 ENO1P06733 434 aaKnown RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 IRF2BP1Q8IU81 584 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 B3GALNT2Q8NCR0 500 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 ARHGAP28Q9P2N2 729 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 VANGL2Q9ULK5 521 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 SRP72O76094 671 aaKnown RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 GJB6O95452 261 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 ESRRGP62508 458 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 ILF2Q12905 390 aaKnown RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 MTFR1Q15390 333 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 CCDC126Q96EE4 140 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 RNPEPQ9H4A4 650 aa12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 DHX33Q9H6R0 707 aaKnown RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 TRIM45Q9H8W5 580 aaPredicted RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 IARS2Q9NSE4 1012 aaKnown RBP12.63□□□□□ -0.39
CYFIP1-207ENST00000617556 PRPF4O43172 522 aaKnown RBP eCLIP12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 PPFIA2O75334 1257 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 MYL4P12829 197 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 PGM1P36871 562 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 RPL21P46778 160 aaKnown RBP12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 NOMO3P69849 1222 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 GRIK3Q13003 919 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 SZRD1Q7Z422 152 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 TOP6BLQ8N6T0 577 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 FAM111AQ96PZ2 611 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 VAT1Q99536 393 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 HEATR9A2RTY3 570 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 MGAT5Q09328 741 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 CDH17Q12864 832 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 RGS9BPQ6ZS82 235 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 FAM183BPQ6ZVS7 135 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 FGFBP2Q9BYJ0 223 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■■■■■ 137.9
CYFIP1-207ENST00000617556 DOT1LQ8TEK3 1739 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 DARSP14868 501 aaKnown RBP12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 KLRC2P26717 231 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 PLA2G4AP47712 749 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 RASIP1Q5U651 963 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 TRPM8Q7Z2W7 1104 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 AGGF1Q8N302 714 aaeCLIP12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 EIF1ADQ8N9N8 165 aaKnown RBP12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 MDM1Q8TC05 714 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 CCDC138Q96M89 665 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 ACP6Q9NPH0 428 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 CBX4O00257 560 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 RIPK2O43353 540 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 CAND2O75155 1236 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 VPS26AO75436 327 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 CKBP12277 381 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 STMN1P16949 149 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 YBX3P16989 372 aaKnown RBP eCLIP12.62□□□□□ -0.397e-7■■□□□ 12.9
CYFIP1-207ENST00000617556 CD52P31358 61 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 KDSRQ06136 332 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 RETSATQ6NUM9 610 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 BSNDQ8WZ55 320 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 PPP1R36Q96LQ0 422 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 MAGEB18Q96M61 343 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 TKTL2Q9H0I9 626 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 DNPEPQ9ULA0 475 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 E2F6O75461 281 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 MAML3Q96JK9 1138 aa12.62□□□□□ -0.39
CYFIP1-207ENST00000617556 ASPSCR1Q9BZE9 553 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms