RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ATMINO43313 823 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 TATP17735 454 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 ADD1P35611 737 aaKnown RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 ERVK-9P63128 1117 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 ERVK-24P63145 666 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 TFCP2Q12800 502 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 QPCTQ16769 361 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 BNIPLQ7Z465 357 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 CLNKQ7Z7G1 428 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 TBC1D19Q8N5T2 526 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 TCEAL7Q9BRU2 100 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 XKR8Q9H6D3 395 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 PKD2L1Q9P0L9 805 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 NUP50Q9UKX7 468 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 GRID1Q9ULK0 1009 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 TNKSO95271 1327 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 RNF103O00237 685 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 EIF3FO00303 357 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 KLHL18O94889 574 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 PSMC2P35998 433 aaKnown RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 LIFRP42702 1097 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 MMRN1Q13201 1228 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 MROH9Q5TGP6 573 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 SLC7A5P1Q8MH63 180 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 PCDHB16Q9NRJ7 776 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 SLAIN2Q9P270 581 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 ADGRA2Q96PE1 1338 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 UBE3CQ15386 1083 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 MYLK3Q32MK0 819 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF572Q7Z3I7 529 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 GDAP2Q9NXN4 497 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 GRIN2DO15399 1336 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 RIPK2O43353 540 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 LDLRP01130 860 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 MAGEA10P43363 369 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 ACTR3P61158 418 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 PPP2R2BQ00005 443 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 STK11Q15831 433 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 SNAP47Q5SQN1 464 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 BPHLQ86WA6 291 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 C12orf50Q8NA57 414 aaPredicted RBP5.09□□□□□ -1.6
VPS13D-213ENST00000613099 LEMD2Q8NC56 503 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 PNPLA8Q9NP80 782 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 VTI1BQ9UEU0 232 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 HMGXB4Q9UGU5 601 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 NR2E3Q9Y5X4 410 aa5.09□□□□□ -1.6
VPS13D-213ENST00000613099 FLT1P17948 1338 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 WRBO00258 174 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 HTRA1Q92743 480 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 MCCC1Q96RQ3 725 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 VPS54Q9P1Q0 977 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 DDAH1O94760 285 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ARHGEF15O94989 841 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 KCNQ4P56696 695 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 DLG1Q12959 904 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CAMK1Q14012 370 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PKN2Q16513 984 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 OR52E8Q6IFG1 317 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 FITM2Q8N6M3 262 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 METTL13Q8N6R0 699 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 POU5F2Q8N7G0 328 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 CDC26Q8NHZ8 85 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ERLEC1Q96DZ1 483 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF486Q96H40 463 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PHF23Q9BUL5 403 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SLC7A5P2Q9GIP4 190 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PIDD1Q9HB75 910 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 RGS17Q9UGC6 210 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 TECPR2O15040 1411 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 GOLGA4Q13439 2230 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ECE2O60344 883 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 EMC2Q15006 297 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 MDH1BQ5I0G3 518 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 TTC23Q5W5X9 447 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 TIGD4Q8IY51 512 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 MCFD2Q8NI22 146 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 C1orf54Q8WWF1 131 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SIK3Q9Y2K2 1263 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 BOLA2-SMG1P6H3BVE0 249 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PSIP1O75475 530 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 GARTP22102 1010 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 NR2F2P24468 414 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 GRIK1P39086 918 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 HNF4AP41235 474 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 ZNF598Q86UK7 904 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 NEUROG2Q9H2A3 272 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SEMA4AQ9H3S1 761 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 VAT1LQ9HCJ6 419 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SCN1BQ07699 218 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SNRNP48Q6IEG0 339 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 FRMD5Q7Z6J6 570 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SLC25A41Q8N5S1 370 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SLC35G2Q8TBE7 412 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 MKRN2Q9H000 416 aaKnown RBP5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SLA2Q9H6Q3 261 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 SYNDIG1Q9H7V2 258 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 GPRC5DQ9NZD1 345 aa5.08□□□□□ -1.6
VPS13D-213ENST00000613099 PLEKHG3A1L390 1219 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms