RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 TRUB2O95900 331 aaKnown RBP17.1■□□□□ 0.33
CNOT3-208ENST00000613073 GPD1P21695 349 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 LMO2P25791 158 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 RGS2P41220 211 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 ZNF143P52747 638 aaPredicted RBP17.1■□□□□ 0.33
CNOT3-208ENST00000613073 CAV1Q03135 178 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 SCYL2Q6P3W7 929 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 NLRP9Q7RTR0 991 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 PPFIBP2Q8ND30 876 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 USP6NLQ92738 828 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 DNAAF2Q9NVR5 837 aaKnown RBP17.1■□□□□ 0.33
CNOT3-208ENST00000613073 KIAA1257Q9ULG3 409 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 DERAQ9Y315 318 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 STARD13Q9Y3M8 1113 aa17.1■□□□□ 0.33
CNOT3-208ENST00000613073 CCDC130P13994 396 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 ADORA2BP29275 332 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 PTPN7P35236 360 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 GDF10P55107 478 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
CNOT3-208ENST00000613073 MYBPC3Q14896 1274 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 IFNL1Q8IU54 200 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 RBM15Q96T37 977 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■□□□ 12.2
CNOT3-208ENST00000613073 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.09■□□□□ 0.33
CNOT3-208ENST00000613073 C2CD4BA6NLJ0 364 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 POC1B-GALNT4F8VUJ3 575 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 CTGFP29279 349 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 FBXO47Q5MNV8 452 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 C10orf82Q8WW14 230 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 GATA6Q92908 595 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 PTPRN2Q92932 1015 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 STMN2Q93045 179 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 TUBGCP5Q96RT8 1024 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 HESX1Q9UBX0 185 aa17.09■□□□□ 0.33
CNOT3-208ENST00000613073 UBQLN1Q9UMX0 589 aaKnown RBP17.09■□□□□ 0.33
CNOT3-208ENST00000613073 GOLGA8MH3BSY2 632 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 MAP3K7O43318 606 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 FGFR1P11362 822 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 NRLP54845 237 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 SLC34A1Q06495 639 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 TWF2Q6IBS0 349 aaKnown RBP17.08■□□□□ 0.33
CNOT3-208ENST00000613073 DRICH1Q6PGQ1 229 aaPredicted RBP17.08■□□□□ 0.33
CNOT3-208ENST00000613073 TTC39CQ8N584 583 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 LRRC52Q8N7C0 313 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 BBOF1Q8ND07 529 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 MCUR1Q96AQ8 359 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 PRR11Q96HE9 360 aaPredicted RBP17.08■□□□□ 0.33
CNOT3-208ENST00000613073 NGRNQ9NPE2 291 aaKnown RBP17.08■□□□□ 0.33
CNOT3-208ENST00000613073 CACNG4Q9UBN1 327 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 IPPQ9Y573 584 aa17.08■□□□□ 0.33
CNOT3-208ENST00000613073 KPNA7A9QM74 516 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 DNALI1O14645 258 aaPredicted RBP17.08■□□□□ 0.32
CNOT3-208ENST00000613073 GABBR2O75899 941 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 PSMG1O95456 288 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 LMNAP02545 664 aaKnown RBP17.08■□□□□ 0.32
CNOT3-208ENST00000613073 CDH6P55285 790 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 PURAQ00577 322 aaKnown RBP17.08■□□□□ 0.32
CNOT3-208ENST00000613073 DEUP1Q05D60 604 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 NPNTQ6UXI9 565 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 SLC35B2Q8TB61 432 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 CLEC4CQ8WTT0 213 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 CNPY3Q9BT09 278 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 GPATCH2LQ9NWQ4 482 aa17.08■□□□□ 0.32
CNOT3-208ENST00000613073 DRG1Q9Y295 367 aaKnown RBP17.08■□□□□ 0.32
CNOT3-208ENST00000613073 CDH16O75309 829 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 ASMTLO95671 621 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 LYNP07948 512 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 CPA2P48052 419 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 OCRLQ01968 901 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 CRHR2Q13324 411 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 MTM1Q13496 603 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 THOC5Q13769 683 aaKnown RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 CCDC14Q49A88 953 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 PLEKHG4Q58EX7 1191 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 RGMBQ6NW40 437 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 VPS52Q8N1B4 723 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 CMASQ8NFW8 434 aaPredicted RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 NKD2Q969F2 451 aaPredicted RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 ZFP42Q96MM3 310 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 APBA2Q99767 749 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 SAYSD1Q9NPB0 183 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 KRT82Q9NSB4 513 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 ARL8BQ9NVJ2 186 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 ZNF236Q9UL36 1845 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 A0A0G2JND7 137 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 ITGAVP06756 1048 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 KRT15P19012 456 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 IGFBP6P24592 240 aaPredicted RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 RPA3P35244 121 aaPredicted RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 GNL1P36915 607 aaPredicted RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 FASTKD3Q14CZ7 662 aaKnown RBP17.07■□□□□ 0.32
CNOT3-208ENST00000613073 CCDC142Q17RM4 750 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 PKDCCQ504Y2 493 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 GNASQ5JWF2 1037 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 OLFML1Q6UWY5 402 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 BBS12Q6ZW61 710 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 SLC35F5Q8WV83 523 aa17.07■□□□□ 0.32
CNOT3-208ENST00000613073 KBTBD7Q8WVZ9 684 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms