RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 IL37Q9NZH6 218 aa12.8□□□□□ -0.36
CBWD1-220ENST00000612045 SAE1Q9UBE0 346 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-220ENST00000612045 A0A1W2PQH9 124 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 APOC4-APOC2K7ER74 178 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 F9P00740 461 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 APOC2P02655 101 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 ECHS1P30084 290 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 PPM1AP35813 382 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 DRG2P55039 364 aaKnown RBP12.79□□□□□ -0.36
CBWD1-220ENST00000612045 OTUD4Q01804 1114 aaKnown RBP12.79□□□□□ -0.36
CBWD1-220ENST00000612045 KRT17Q04695 432 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 PPP1R7Q15435 360 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 BTBD8Q5XKL5 378 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 EMBQ6PCB8 327 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 SYDE1Q6ZW31 735 aaPredicted RBP12.79□□□□□ -0.36
CBWD1-220ENST00000612045 MON1AQ86VX9 555 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 PCDH19Q8TAB3 1148 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 ACTL9Q8TC94 416 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 DQX1Q8TE96 717 aaKnown RBP12.79□□□□□ -0.36
CBWD1-220ENST00000612045 NMUR1Q9HB89 426 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 AAASQ9NRG9 546 aa12.79□□□□□ -0.36
CBWD1-220ENST00000612045 FAM92AA1XBS5 289 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 RTN3O95197 1032 aaPredicted RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 GAS8O95995 478 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 YWHAQP27348 245 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 ADRA1BP35368 520 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 AIF1P55008 147 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 VCPP55072 806 aaKnown RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 RPL10AP62906 217 aaKnown RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 HLTFQ14527 1009 aaKnown RBP eCLIP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 OASLQ15646 514 aaKnown RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 MTERF4Q7Z6M4 381 aaKnown RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 TAC4Q86UU9 113 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 PYROXD2Q8N2H3 581 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 FIBCD1Q8N539 461 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 PQLC3Q8N755 202 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 SLC35B2Q8TB61 432 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 NKD2Q969F2 451 aaPredicted RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 NTAN1Q96AB6 310 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 TMPRSS4Q9NRS4 437 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 ZNF148Q9UQR1 794 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 DRG1Q9Y295 367 aaKnown RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 SNX24Q9Y343 169 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 INSL6Q9Y581 213 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 PCDHB12Q9Y5F1 795 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 PLXNA3P51805 1871 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 MYO16Q9Y6X6 1858 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 KIAA1671Q9BY89 1806 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 ATP8B1O43520 1251 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 ABLIM3O94929 683 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 IGLV3-25P01717 112 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 URODP06132 367 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 ITGAVP06756 1048 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 LINC00271P0C7V0 271 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 PECAM1P16284 738 aaPredicted RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 SYN1P17600 705 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 GBP1P32455 592 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 CXCR3P49682 368 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 LMNB2Q03252 620 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 SCAPQ12770 1279 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 PTK6Q13882 451 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 EFHC2Q5JST6 749 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 VPS52Q8N1B4 723 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 PLD5Q8N7P1 536 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 ZNF461Q8TAF7 563 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 GDAP1L1Q96MZ0 367 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 FUT8Q9BYC5 575 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 NEUROG2Q9H2A3 272 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 COMMD8Q9NX08 183 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 OSER1Q9NX31 292 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 CWC15Q9P013 229 aaKnown RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 GMIPQ9P107 970 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 RCOR3Q9P2K3 495 aaPredicted RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
CBWD1-220ENST00000612045 NEU2Q9Y3R4 380 aa12.78□□□□□ -0.36
CBWD1-220ENST00000612045 I6L893 689 aaPredicted RBP12.77□□□□□ -0.37
CBWD1-220ENST00000612045 APOL1O14791 398 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 SASH3O75995 380 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 FAM153BP0C7A2 387 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 GOT1P17174 413 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 ATF6P18850 670 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 TGM2P21980 687 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 TNNT3P45378 269 aaPredicted RBP12.77□□□□□ -0.37
CBWD1-220ENST00000612045 RPL21P46778 160 aaKnown RBP12.77□□□□□ -0.37
CBWD1-220ENST00000612045 TUFMP49411 452 aaKnown RBP12.77□□□□□ -0.37
CBWD1-220ENST00000612045 EIF4EBP2Q13542 120 aaPredicted RBP12.77□□□□□ -0.37
CBWD1-220ENST00000612045 MTMR3Q13615 1198 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 ARL13BQ3SXY8 428 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 FAM153CQ494X1 144 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 TPGS2Q68CL5 300 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 NPNTQ6UXI9 565 aa12.77□□□□□ -0.37
CBWD1-220ENST00000612045 GSTA5Q7RTV2 222 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms