RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PEX5P50542 639 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 HIC1Q14526 733 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 FRA10AC1Q70Z53 315 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 ATXN2LQ8WWM7 1075 aaKnown RBP13.56□□□□□ -0.24
TCF3-220ENST00000611869 NSL1Q96IY1 281 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 TXNRD2Q9NNW7 524 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 SCOCQ9UIL1 159 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 TELO2Q9Y4R8 837 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 CDY2AQ9Y6F7 541 aa13.56□□□□□ -0.24
TCF3-220ENST00000611869 SLC15A5A6NIM6 579 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 CILPO75339 1184 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 ANXA9O76027 345 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 MBTD1Q05BQ5 628 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 MAP2K5Q13163 448 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 ANKRD52Q8NB46 1076 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 B3GALNT2Q8NCR0 500 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 FBXO32Q969P5 355 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 LENG1Q96BZ8 264 aaPredicted RBP13.55□□□□□ -0.24
TCF3-220ENST00000611869 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.55□□□□□ -0.243e-6■■■■■ 32.1
TCF3-220ENST00000611869 CACNA1SQ13698 1873 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 GLRA3O75311 464 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 HADHBP55084 474 aaKnown RBP13.55□□□□□ -0.24
TCF3-220ENST00000611869 NOL9Q5SY16 702 aaKnown RBP13.55□□□□□ -0.24
TCF3-220ENST00000611869 CCNJLQ8IV13 435 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 POPDC2Q9HBU9 364 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 ETNK2Q9NVF9 386 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 LTFP02788 710 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 ACCSLQ4AC99 568 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 CTXN3Q4LDR2 81 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 DDIASQ8IXT1 998 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 SRPK1Q96SB4 655 aaKnown RBP13.55□□□□□ -0.24
TCF3-220ENST00000611869 ADAM2Q99965 735 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 EFHD1Q9BUP0 239 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 LHX5Q9H2C1 402 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 NRDE2Q9H7Z3 1164 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 NDE1Q9NXR1 346 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 VANGL2Q9ULK5 521 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 TRPV2Q9Y5S1 764 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 NWD2Q9ULI1 1742 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 GOLGA8TH3BQL2 631 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 TM9SF1O15321 606 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 HNRNPCL1O60812 293 aaKnown RBP13.55□□□□□ -0.24
TCF3-220ENST00000611869 AVILO75366 819 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 MMP3P08254 477 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 NPR3P17342 541 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 PTGIRP43119 386 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 SERPINB4P48594 390 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 LINC00523Q86TU6 105 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 XYLT1Q86Y38 959 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 MTBPQ96DY7 904 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 FIZ1Q96SL8 496 aa13.55□□□□□ -0.24
TCF3-220ENST00000611869 MTA2O94776 668 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 CD48P09326 243 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 YBX3P16989 372 aaKnown RBP eCLIP13.54□□□□□ -0.244e-8■□□□□ 11.1
TCF3-220ENST00000611869 NR2C2P49116 596 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 AQP5P55064 265 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 POU6F1Q14863 301 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 TFAP2DQ7Z6R9 452 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 CDC26Q8NHZ8 85 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 WNT8BQ93098 351 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 SMARCD1Q96GM5 515 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 HSFY1Q96LI6 401 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 UNKQ9C0B0 810 aaKnown RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 ATXN3LQ9H3M9 355 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 AIM2O14862 343 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 SNX3O60493 162 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 GOT1P17174 413 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 NOS2P35228 1153 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 PPARGP37231 505 aaPredicted RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 AP2B1P63010 937 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 MGAT5Q09328 741 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 LRRC36Q1X8D7 754 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 SLC10A6Q3KNW5 377 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 PCSK9Q8NBP7 692 aaKnown RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 CKAP2Q8WWK9 683 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 ZNF75CPQ92670 426 aaPredicted RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 TKTL2Q9H0I9 626 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 RBM22Q9NW64 420 aaKnown RBP eCLIP13.54□□□□□ -0.243e-6■■■■■ 30.2
TCF3-220ENST00000611869 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 SUN2Q9UH99 717 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 PCDHB7Q9Y5E2 793 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 ADAMTS7Q9UKP4 1686 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 ZC3H4Q9UPT8 1303 aaKnown RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 N4BP2Q86UW6 1770 aaPredicted RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 PMM2O15305 246 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 ENO3P13929 434 aaPredicted RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 ATXN3P54252 364 aaPredicted RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 MPP3Q13368 585 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 HSP90AA5PQ58FG0 334 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 SLC45A4Q5BKX6 768 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 SLC4A11Q8NBS3 891 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.54□□□□□ -0.243e-7■■■■■ 91.3
TCF3-220ENST00000611869 BLOC1S5Q8TDH9 187 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 FAM136AQ96C01 138 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 TMEM120AQ9BXJ8 343 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 EIF2AQ9BY44 585 aaKnown RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 MINDY3Q9H8M7 445 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
TCF3-220ENST00000611869 PRDM5Q9NQX1 630 aaPredicted RBP13.54□□□□□ -0.24
TCF3-220ENST00000611869 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms