RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 ALOX15P16050 662 aaPredicted RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 CYP2F1P24903 491 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 ELK3P41970 407 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 SKIV2L2P42285 1042 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 AGKQ53H12 422 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 FAM45BPQ6NSW5 357 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 OPTNQ96CV9 577 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 VAT1Q99536 393 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 AGO4Q9HCK5 861 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 MYRFQ9Y2G1 1151 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 H7C4K7 107 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 NR5A2O00482 541 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 BCL10O95999 233 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 C1DQ13901 141 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 RRP1BQ14684 758 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 TATDN2Q93075 761 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 SRPK1Q96SB4 655 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 C9orf16Q9BUW7 83 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 V9GYQ6 96 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 DDX3XO00571 662 aaKnown RBP eCLIP21.65■■□□□ 1.063e-14■□□□□ 8.9
SH3D19-211ENST00000604030 HMGB3O15347 200 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 RNF43Q68DV7 783 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 DDX53Q86TM3 631 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 DHFR2Q86XF0 187 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 CROCCP3Q8IVE0 287 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 LZTR1Q8N653 840 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 SNRNP27Q8WVK2 155 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 CKAP2Q8WWK9 683 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 ZNF184Q99676 751 aaPredicted RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 EMILIN2Q9BXX0 1053 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 SESN1Q9Y6P5 492 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 SERPIND1P05546 499 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 EPS8Q12929 822 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 SAMD4BQ5PRF9 694 aaKnown RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 NSMCE2Q96MF7 247 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 RPRD1AQ96P16 312 aaPredicted RBP21.65■■□□□ 1.06
SH3D19-211ENST00000604030 CAMKK2Q96RR4 588 aa21.65■■□□□ 1.06
SH3D19-211ENST00000604030 POLD3Q15054 466 aaPredicted RBP21.64■■□□□ 1.06
SH3D19-211ENST00000604030 FUT11Q495W5 492 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 SLC5A5Q92911 643 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 PNMA5Q96PV4 448 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 CLPBQ9H078 707 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 CYP39A1Q9NYL5 469 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 NWD1Q149M9 1564 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 ACOT1Q86TX2 421 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.06
SH3D19-211ENST00000604030 GPRC5CQ9NQ84 441 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 GPRC5DQ9NZD1 345 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 CLCA2Q9UQC9 943 aa21.64■■□□□ 1.06
SH3D19-211ENST00000604030 A0A087WXM4 84 aa21.64■■□□□ 1.05
SH3D19-211ENST00000604030 TCRBV5S4A2TA0A5A2 114 aa21.64■■□□□ 1.05
SH3D19-211ENST00000604030 PECAM1P16284 738 aaPredicted RBP21.64■■□□□ 1.05
SH3D19-211ENST00000604030 SLC25A23Q9BV35 468 aa21.64■■□□□ 1.05
SH3D19-211ENST00000604030 SYNPO2Q9UMS6 1093 aa21.64■■□□□ 1.05
SH3D19-211ENST00000604030 TMEM114B3SHH9 223 aa21.64■■□□□ 1.05
SH3D19-211ENST00000604030 STAG3L1P0CL83 205 aa21.64■■□□□ 1.05
SH3D19-211ENST00000604030 NAA20P61599 178 aa21.64■■□□□ 1.05
SH3D19-211ENST00000604030 PLEKHA7Q6IQ23 1121 aa21.64■■□□□ 1.05
SH3D19-211ENST00000604030 BARX2Q9UMQ3 279 aaPredicted RBP21.64■■□□□ 1.05
SH3D19-211ENST00000604030 ACO1P21399 889 aaKnown RBP21.63■■□□□ 1.05
SH3D19-211ENST00000604030 AVPR1AP37288 418 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 ELF3P78545 371 aaPredicted RBP21.63■■□□□ 1.05
SH3D19-211ENST00000604030 LRRC38Q5VT99 294 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 ZPBP2Q6X784 338 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 OTOAQ7RTW8 1153 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 FAM120BQ96EK7 910 aaKnown RBP21.63■■□□□ 1.05
SH3D19-211ENST00000604030 CEP44Q9C0F1 390 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 RNPEPL1Q9HAU8 725 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 USE1Q9NZ43 259 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 GGA3Q9NZ52 723 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 EIF4BP23588 611 aaKnown RBP21.63■■□□□ 1.05
SH3D19-211ENST00000604030 ALDH1A3P47895 512 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 ADGRF2Q8IZF7 708 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 NMD3Q96D46 503 aaKnown RBP21.63■■□□□ 1.05
SH3D19-211ENST00000604030 ZFP42Q96MM3 310 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 COLEC11Q9BWP8 271 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 NMRAL1Q9HBL8 299 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 RNF181Q9P0P0 153 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 SPATA31A1Q5TZJ5 1347 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 DIP2AQ14689 1571 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 PNMA8CA0A1B0GUJ8 204 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 LDLRP01130 860 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 FAM153BP0C7A2 387 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 CCT8P50990 548 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 FAM153CQ494X1 144 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 UGT2B28Q9BY64 529 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 PCYOX1Q9UHG3 505 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 SETD1BQ9UPS6 1966 aaKnown RBP21.63■■□□□ 1.05
SH3D19-211ENST00000604030 APOC4-APOC2K7ER74 178 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 PRRG1O14668 218 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 APOC2P02655 101 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 C6orf222P0C671 652 aaPredicted RBP21.63■■□□□ 1.05
SH3D19-211ENST00000604030 TXNRD3Q86VQ6 643 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 ZNF606Q8WXB4 792 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 OLFM1Q99784 485 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 FICDQ9BVA6 458 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 MYLK2Q9H1R3 596 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 MYOZ2Q9NPC6 264 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 KRT6AP02538 564 aa21.63■■□□□ 1.05
SH3D19-211ENST00000604030 KRT6BP04259 564 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms