RNA–Protein interactions for RNA: ENST00000602290.1

HCG18-241, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 821 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-241ENST00000602290 OTUB2Q96DC9 234 aa12.4□□□□□ -0.42
HCG18-241ENST00000602290 ZBTB45Q96K62 511 aaPredicted RBP12.4□□□□□ -0.42
HCG18-241ENST00000602290 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
HCG18-241ENST00000602290 CCSER1Q9C0I3 900 aa12.4□□□□□ -0.42
HCG18-241ENST00000602290 TMEM134Q9H6X4 195 aa12.4□□□□□ -0.42
HCG18-241ENST00000602290 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
HCG18-241ENST00000602290 PCDHB6Q9Y5E3 794 aa12.4□□□□□ -0.42
HCG18-241ENST00000602290 CKAP5Q14008 2032 aa12.4□□□□□ -0.42
HCG18-241ENST00000602290 PIRO00625 290 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 VILLO15195 856 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 YKT6O15498 198 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 CACNG3O60359 315 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 CCNT1O60563 726 aaKnown RBP12.39□□□□□ -0.43
HCG18-241ENST00000602290 USP12O75317 370 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 ITGAVP06756 1048 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 CYP2F1P24903 491 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 USP8P40818 1118 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 COPAP53621 1224 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 AKAP17AQ02040 695 aaKnown RBP12.39□□□□□ -0.43
HCG18-241ENST00000602290 NFE2Q16621 373 aaPredicted RBP12.39□□□□□ -0.43
HCG18-241ENST00000602290 PRAMEF14Q5SWL7 426 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 SPATA1Q5VX52 437 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 C9orf57Q5W0N0 161 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 WSCD1Q658N2 575 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 GRAMD4Q6IC98 578 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 MMS22LQ6ZRQ5 1243 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 NUDT18Q6ZVK8 323 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 CCDC186Q7Z3E2 898 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 CCDC97Q96F63 343 aaPredicted RBP12.39□□□□□ -0.43
HCG18-241ENST00000602290 MRFAP1L1Q96HT8 127 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 CCNL2Q96S94 520 aaPredicted RBP12.39□□□□□ -0.43
HCG18-241ENST00000602290 SLC25A18Q9H1K4 315 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 CXorf56Q9H5V9 222 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 SMPD4Q9NXE4 827 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 TBC1D14Q9P2M4 693 aa12.39□□□□□ -0.43
HCG18-241ENST00000602290 ATXN7L1Q9ULK2 861 aaPredicted RBP12.39□□□□□ -0.43
HCG18-241ENST00000602290 SCN1AP35498 2009 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 CDRT15L2A8MXV6 281 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 TSPAN3O60637 253 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
HCG18-241ENST00000602290 ADRB2P07550 413 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 CD27P26842 260 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 CCDC142Q17RM4 750 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 CFAP221Q4G0U5 840 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 CT47A1Q5JQC4 288 aaPredicted RBP12.38□□□□□ -0.43
HCG18-241ENST00000602290 BTBD8Q5XKL5 378 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 GALNT17Q6IS24 598 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 RBM43Q6ZSC3 357 aaKnown RBP12.38□□□□□ -0.43
HCG18-241ENST00000602290 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 EGFL6Q8IUX8 553 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 C10orf67Q8IYJ2 551 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 THEM5Q8N1Q8 247 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 ZNF564Q8TBZ8 553 aaPredicted RBP12.38□□□□□ -0.43
HCG18-241ENST00000602290 BIRC7Q96CA5 298 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 SIPA1Q96FS4 1042 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 PRR11Q96HE9 360 aaPredicted RBP12.38□□□□□ -0.43
HCG18-241ENST00000602290 IFT74Q96LB3 600 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 ARHGAP9Q9BRR9 750 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 TRIM9Q9C026 710 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 RPF1Q9H9Y2 349 aaKnown RBP12.38□□□□□ -0.43
HCG18-241ENST00000602290 POLD4Q9HCU8 107 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 SPHK2Q9NRA0 654 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 LRWD1Q9UFC0 647 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 STON1Q9Y6Q2 735 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 AKAP9Q99996 3911 aa12.38□□□□□ -0.43
HCG18-241ENST00000602290 HIVEP1P15822 2718 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 ZNF840PA6NDX5 716 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 FAM189A1O60320 539 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 TOM1L1O75674 476 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 WNT1P04628 370 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 ABCB4P21439 1286 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 ACSL1P33121 698 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 CASRP41180 1078 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 NPTX2P47972 431 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 CLCN6P51797 869 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 ZNF132P52740 706 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 INHBCP55103 352 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 GSDMDP57764 484 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 USP46P62068 366 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 E2F1Q01094 437 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 MCL1Q07820 350 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 STARD3Q14849 445 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 SKIDA1Q1XH10 827 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 DDX42Q86XP3 938 aaKnown RBP eCLIP12.37□□□□□ -0.43
HCG18-241ENST00000602290 TMEM25Q86YD3 366 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 FAM177A1Q8N128 213 aaPredicted RBP12.37□□□□□ -0.43
HCG18-241ENST00000602290 KIFAP3Q92845 792 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 SGF29Q96ES7 293 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 DRC1Q96MC2 740 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 SLC46A1Q96NT5 459 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 TTLL2Q9BWV7 592 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
HCG18-241ENST00000602290 ABCA2Q9BZC7 2435 aa12.37□□□□□ -0.43
HCG18-241ENST00000602290 CSMD2Q7Z408 3487 aa12.36□□□□□ -0.43
HCG18-241ENST00000602290 PLXNA2O75051 1894 aa12.36□□□□□ -0.43
HCG18-241ENST00000602290 CYB561D2O14569 222 aa12.36□□□□□ -0.43
HCG18-241ENST00000602290 XPOTO43592 962 aaKnown RBP12.36□□□□□ -0.43
HCG18-241ENST00000602290 CSO75390 466 aaKnown RBP12.36□□□□□ -0.43
HCG18-241ENST00000602290 MED24O75448 989 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms