RNA–Protein interactions for RNA: ENST00000602224.5

CD22-233, Transcript of CD22 molecule, human

TSL 3

Gene CD22, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD22-233	ENST00000602224	KCNK16	Q96T55	309 aa		13.18	□□□□□ -0.3
CD22-233	ENST00000602224	STRA6	Q9BX79	667 aa		13.18	□□□□□ -0.3
CD22-233	ENST00000602224	ELOVL4	Q9GZR5	314 aa		13.18	□□□□□ -0.3
CD22-233	ENST00000602224	MRPL44	Q9H9J2	332 aa	Known RBP	13.18	□□□□□ -0.3
CD22-233	ENST00000602224	INTS13	Q9NVM9	706 aa		13.18	□□□□□ -0.3
CD22-233	ENST00000602224	ANKRD6	Q9Y2G4	727 aa		13.18	□□□□□ -0.3
CD22-233	ENST00000602224	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.18	□□□□□ -0.3
CD22-233	ENST00000602224	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.17	□□□□□ -0.3
CD22-233	ENST00000602224	DOPEY2	Q9Y3R5	2298 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	TEX51	A0A1B0GUA7	166 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	TNNC2	P02585	160 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	UBA7	P41226	1012 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	GRIN1	Q05586	938 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	TAF1B	Q53T94	588 aa	Predicted RBP	13.17	□□□□□ -0.3
CD22-233	ENST00000602224	LARP4B	Q92615	738 aa	Known RBP	13.17	□□□□□ -0.3
CD22-233	ENST00000602224	HVCN1	Q96D96	273 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	ACCS	Q96QU6	501 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	ARID3A	Q99856	593 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	DUSP9	Q99956	384 aa	Known RBP	13.17	□□□□□ -0.3
CD22-233	ENST00000602224	FGFBP2	Q9BYJ0	223 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	PANK2	Q9BZ23	570 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	SEMA4C	Q9C0C4	833 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	CLMP	Q9H6B4	373 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	TM9SF3	Q9HD45	589 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	MARK1	Q9P0L2	795 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	WDR35	Q9P2L0	1181 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.17	□□□□□ -0.3
CD22-233	ENST00000602224	MTMR6	Q9Y217	621 aa		13.17	□□□□□ -0.3
CD22-233	ENST00000602224	COL5A1	P20908	1838 aa	Predicted RBP	13.16	□□□□□ -0.3
CD22-233	ENST00000602224	COL12A1	Q99715	3063 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	MDM4	O15151	490 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	PCDHGA12	O60330	932 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	TLR5	O60602	858 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	ACADM	P11310	421 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	GART	P22102	1010 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	OXTR	P30559	389 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	HNF1B	P35680	557 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	NASP	P49321	788 aa	Predicted RBP	13.16	□□□□□ -0.3
CD22-233	ENST00000602224	TUB	P50607	506 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	COPA	P53621	1224 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	UBE2H	P62256	183 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	TLE3	Q04726	772 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
CD22-233	ENST00000602224	GEN1	Q17RS7	908 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	RILPL1	Q5EBL4	403 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	PRAMEF14	Q5SWL7	426 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	HES3	Q5TGS1	186 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	SNX30	Q5VWJ9	437 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.16	□□□□□ -0.3
CD22-233	ENST00000602224	USP49	Q70CQ1	688 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	HTR3D	Q70Z44	454 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	FAM35A	Q86V20	835 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	GATAD2A	Q86YP4	633 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	KRI1	Q8N9T8	703 aa	Known RBP	13.16	□□□□□ -0.3
CD22-233	ENST00000602224	B3GALNT2	Q8NCR0	500 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	SNIP1	Q8TAD8	396 aa	Known RBP	13.16	□□□□□ -0.3
CD22-233	ENST00000602224	SORCS1	Q8WY21	1168 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	PRCC	Q92733	491 aa	Predicted RBP	13.16	□□□□□ -0.3
CD22-233	ENST00000602224	IGSF8	Q969P0	613 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	NUP58	Q9BVL2	599 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	KLF16	Q9BXK1	252 aa	Predicted RBP	13.16	□□□□□ -0.3
CD22-233	ENST00000602224	TMEM63C	Q9P1W3	806 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	EXOC7	Q9UPT5	735 aa		13.16	□□□□□ -0.3
CD22-233	ENST00000602224	USP9X	Q93008	2570 aa	Predicted RBP	13.15	□□□□□ -0.3
CD22-233	ENST00000602224	ENC1	O14682	589 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	BRINP1	O60477	761 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	SYNCRIP	O60506	623 aa	Known RBP	13.15	□□□□□ -0.3
CD22-233	ENST00000602224	GCNT3	O95395	438 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	LDHA	P00338	332 aa	Known RBP	13.15	□□□□□ -0.3
CD22-233	ENST00000602224	IGLV3-19	P01714	112 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	ZDHHC11B	P0C7U3	371 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	KRT10	P13645	584 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	PRKCH	P24723	683 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	ACSL1	P33121	698 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	CTSK	P43235	329 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	GRIA4	P48058	902 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	CDH8	P55286	799 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	TEAD4	Q15561	434 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	CBWD2	Q8IUF1	395 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	LURAP1L	Q8IV03	231 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	FMNL3	Q8IVF7	1028 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	SPACA3	Q8IXA5	215 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	SYCP3	Q8IZU3	236 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	FAM181A	Q8N9Y4	354 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	ENGASE	Q8NFI3	743 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	BAP1	Q92560	729 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	AK8	Q96MA6	479 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	MED10	Q9BTT4	135 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	NUDT5	Q9UKK9	219 aa		13.15	□□□□□ -0.3
CD22-233	ENST00000602224	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.15	□□□□□ -0.3
CD22-233	ENST00000602224	SPTAN1	Q13813	2472 aa	Known RBP	13.14	□□□□□ -0.31
CD22-233	ENST00000602224		A8MXQ7	604 aa		13.14	□□□□□ -0.31
CD22-233	ENST00000602224	SLC26A4	O43511	780 aa		13.14	□□□□□ -0.31
CD22-233	ENST00000602224	TACC1	O75410	805 aa		13.14	□□□□□ -0.31
CD22-233	ENST00000602224	RFPL3	O75679	317 aa		13.14	□□□□□ -0.31
CD22-233	ENST00000602224	PRPF6	O94906	941 aa	Known RBP	13.14	□□□□□ -0.31
CD22-233	ENST00000602224	FSBP	O95073	299 aa		13.14	□□□□□ -0.31
CD22-233	ENST00000602224	MFAP3	P55082	362 aa		13.14	□□□□□ -0.31
CD22-233	ENST00000602224	LY6D	Q14210	128 aa		13.14	□□□□□ -0.31
CD22-233	ENST00000602224	ZNF234	Q14588	700 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms