RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 TNFAIP2Q03169 654 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 BIRC2Q13490 618 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 PROSER3Q2NL68 480 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 PRAMEF17Q5VTA0 474 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 ARL6IP4Q66PJ3 421 aaKnown RBP4.01□□□□□ -1.77
VMP1-212ENST00000591782 SERPINA13PQ6UXR4 307 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 CHSY1Q86X52 802 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 RASGRP3Q8IV61 690 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 LINC01465Q8N7H1 131 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.01□□□□□ -1.77
VMP1-212ENST00000591782 ZNF527Q8NB42 609 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 NGDNQ8NEJ9 315 aaKnown RBP4.01□□□□□ -1.77
VMP1-212ENST00000591782 MAFAQ8NHW3 353 aaPredicted RBP4.01□□□□□ -1.77
VMP1-212ENST00000591782 NTN5Q8WTR8 489 aaPredicted RBP4.01□□□□□ -1.77
VMP1-212ENST00000591782 POF1BQ8WVV4 589 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 PRR11Q96HE9 360 aaPredicted RBP4.01□□□□□ -1.77
VMP1-212ENST00000591782 EPS8L2Q9H6S3 715 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 SAP30LQ9HAJ7 183 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 FSCN3Q9NQT6 498 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 VPS45Q9NRW7 570 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 PTGFRNQ9P2B2 879 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 DTNAQ9Y4J8 743 aa4.01□□□□□ -1.77
VMP1-212ENST00000591782 GOLGA6L3A6NEY3 463 aa4□□□□□ -1.77
VMP1-212ENST00000591782 LINC01548A6NM66 108 aa4□□□□□ -1.77
VMP1-212ENST00000591782 LGALS16A8MUM7 142 aa4□□□□□ -1.77
VMP1-212ENST00000591782 TISP43B9A030 160 aa4□□□□□ -1.77
VMP1-212ENST00000591782 J3KTA2 159 aa4□□□□□ -1.77
VMP1-212ENST00000591782 PCDH17O14917 1159 aa4□□□□□ -1.77
VMP1-212ENST00000591782 DHHO43323 396 aa4□□□□□ -1.77
VMP1-212ENST00000591782 PRAMEF2O60811 474 aa4□□□□□ -1.77
VMP1-212ENST00000591782 RBMXL2O75526 392 aaKnown RBP4□□□□□ -1.77
VMP1-212ENST00000591782 USP1O94782 785 aa4□□□□□ -1.77
VMP1-212ENST00000591782 MT-CO3P00414 261 aa4□□□□□ -1.77
VMP1-212ENST00000591782 GPC5P78333 572 aa4□□□□□ -1.77
VMP1-212ENST00000591782 TXNL4AP83876 142 aaKnown RBP4□□□□□ -1.77
VMP1-212ENST00000591782 CHAF1AQ13111 956 aaPredicted RBP4□□□□□ -1.77
VMP1-212ENST00000591782 DNASE1L3Q13609 305 aa4□□□□□ -1.77
VMP1-212ENST00000591782 KCNJ12Q14500 433 aa4□□□□□ -1.77
VMP1-212ENST00000591782 P3H1Q32P28 736 aa4□□□□□ -1.77
VMP1-212ENST00000591782 C10orf62Q5T681 223 aaPredicted RBP4□□□□□ -1.77
VMP1-212ENST00000591782 ZNF782Q6ZMW2 699 aaPredicted RBP4□□□□□ -1.77
VMP1-212ENST00000591782 MTERF4Q7Z6M4 381 aaKnown RBP4□□□□□ -1.77
VMP1-212ENST00000591782 MYLK4Q86YV6 388 aaPredicted RBP4□□□□□ -1.77
VMP1-212ENST00000591782 OTUD6BQ8N6M0 293 aa4□□□□□ -1.77
VMP1-212ENST00000591782 C12orf76Q8N812 135 aaPredicted RBP4□□□□□ -1.77
VMP1-212ENST00000591782 PNLDC1Q8NA58 520 aaKnown RBP4□□□□□ -1.77
VMP1-212ENST00000591782 MORC4Q8TE76 937 aa4□□□□□ -1.77
VMP1-212ENST00000591782 HASPINQ8TF76 798 aa4□□□□□ -1.77
VMP1-212ENST00000591782 STYXQ8WUJ0 223 aa4□□□□□ -1.77
VMP1-212ENST00000591782 PMM1Q92871 262 aa4□□□□□ -1.77
VMP1-212ENST00000591782 EDC3Q96F86 508 aaKnown RBP4□□□□□ -1.77
VMP1-212ENST00000591782 ZNF764Q96H86 408 aaPredicted RBP4□□□□□ -1.77
VMP1-212ENST00000591782 RITA1Q96K30 269 aa4□□□□□ -1.77
VMP1-212ENST00000591782 PRPF18Q99633 342 aaKnown RBP4□□□□□ -1.77
VMP1-212ENST00000591782 USP29Q9HBJ7 922 aa4□□□□□ -1.77
VMP1-212ENST00000591782 OBP2BQ9NPH6 170 aa4□□□□□ -1.77
VMP1-212ENST00000591782 CA14Q9ULX7 337 aa4□□□□□ -1.77
VMP1-212ENST00000591782 PCDHB2Q9Y5E7 798 aa4□□□□□ -1.77
VMP1-212ENST00000591782 UNC13AQ9UPW8 1703 aa4□□□□□ -1.77
VMP1-212ENST00000591782 CUX2O14529 1486 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 WIPF3A6NGB9 483 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 POC1B-GALNT4F8VUJ3 575 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 NPC1O15118 1278 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 ASNA1O43681 348 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 PPFIA2O75334 1257 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 TAF5LO75529 589 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 GCATO75600 419 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 TNFRSF6BO95407 300 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 NTSR2O95665 410 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 GLP2RO95838 553 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 LDHAP00338 332 aaKnown RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 MBPP02686 304 aaPredicted RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 ANXA6P08133 673 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 TMIGD3P0DMS9 266 aaPredicted RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 NPPBP16860 134 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 ATF7P17544 494 aaPredicted RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 PDIA3P30101 505 aaKnown RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 DGKQP52824 942 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 CFHR3Q02985 330 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 CCDC15Q0P6D6 951 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 GALNT1Q10472 559 aaPredicted RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 BFSP2Q13515 415 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 MYBPC2Q14324 1141 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 SPARCL1Q14515 664 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 MFSD13AQ14CX5 517 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 PUM3Q15397 648 aaKnown RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 PFKFB4Q16877 469 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 FAM187BQ17R55 369 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 AWAT1Q58HT5 328 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 FAM90A2PQ658T7 463 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 PGBD2Q6P3X8 592 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 TLDC1Q6P9B6 456 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 TMEM65Q6PI78 240 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 DCDC5Q6ZRR9 648 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 PIK3AP1Q6ZUJ8 805 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 NBPF5PQ86XG9 351 aaPredicted RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.99□□□□□ -1.77
VMP1-212ENST00000591782 CLASRPQ8N2M8 674 aaKnown RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 GALNT4Q8N4A0 578 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 FAM71DQ8N9W8 422 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms