RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 COMMD8Q9NX08 183 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 FBXW11Q9UKB1 542 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 NUDT5Q9UKK9 219 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 RAB21Q9UL25 225 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 MYO16Q9Y6X6 1858 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 ZSCAN5CA6NGD5 496 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 TTI1O43156 1089 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CST8O60676 142 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CXCL14O95715 111 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 H2AFXP16104 143 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 DNAJB1P25685 340 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 ADRA1BP35368 520 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 PTGIRP43119 386 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 KCNJ1P48048 391 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 VSNL1P62760 191 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CREMQ03060 361 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 SNX1Q13596 522 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 KRT81Q14533 505 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CCNG2Q16589 344 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 PPP6R3Q5H9R7 873 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CCDC70Q6NSX1 233 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 WDR93Q6P2C0 686 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CCDC137Q6PK04 289 aaKnown RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 BBS12Q6ZW61 710 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 TMC7Q7Z402 723 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 PSTKQ8IV42 348 aaKnown RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 MAP7D3Q8IWC1 876 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 TCEAL8Q8IYN2 117 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 ARHGAP18Q8N392 663 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 SPPL3Q8TCT6 385 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 CASP10Q92851 521 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 NTAN1Q96AB6 310 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 RNF157Q96PX1 679 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 KCTD15Q96SI1 283 aaPredicted RBP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 SMOC2Q9H3U7 446 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.84□□□□□ -0.51
TUBD1-211ENST00000591548 STIM2Q9P246 746 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 PCYOX1Q9UHG3 505 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 SFMBT1Q9UHJ3 866 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 SSX2IPQ9Y2D8 614 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 YIPF1Q9Y548 306 aa11.84□□□□□ -0.51
TUBD1-211ENST00000591548 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 BHMG1C9JSJ3 638 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 C5orf67F2Z3F1 127 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 IRAK2O43187 625 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 TGM5O43548 720 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 HEXIM1O94992 359 aaKnown RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 ZDHHC11BP0C7U3 371 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 SPATA31D3P0C874 917 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 HMGA1P17096 107 aaKnown RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 CA8P35219 290 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 FNTAP49354 379 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 AIF1P55008 147 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 DYNLT1P63172 113 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 DR1Q01658 176 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 ANKRD20A8PQ5CZ79 823 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 MSANTD2Q6P1R3 559 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 FBXO38Q6PIJ6 1188 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 SPATA31D4Q6ZUB0 917 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 MAATS1Q7Z4T9 603 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 RFX6Q8HWS3 928 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 PCDH19Q8TAB3 1148 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 CCDC26Q8TAB7 109 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 RNF139Q8WU17 664 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 FAF2Q96CS3 445 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 TCF25Q9BQ70 676 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 ZNF670Q9BS34 389 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 TLR8Q9NR97 1041 aaKnown RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 CLIC5Q9NZA1 410 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 CHD7Q9P2D1 2997 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 SAE1Q9UBE0 346 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 MAGED2Q9UNF1 606 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 RWDD3Q9Y3V2 267 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 NR2E3Q9Y5X4 410 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 IRAK3Q9Y616 596 aa11.83□□□□□ -0.52
TUBD1-211ENST00000591548 ZNF638Q14966 1978 aaKnown RBP11.83□□□□□ -0.52
TUBD1-211ENST00000591548 HIDE1A8MVS5 230 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 ZNF487B1APH4 448 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 PRRG1O14668 218 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 MSI1O43347 362 aaKnown RBP11.82□□□□□ -0.52
TUBD1-211ENST00000591548 LIASO43766 372 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 CA3P07451 260 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 RARGP13631 454 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 GBP1P32455 592 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 ALDH1A3P47895 512 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 PSEN1P49768 467 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 GUCY2DQ02846 1103 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 SCAPQ12770 1279 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 CAMK1Q14012 370 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 DHX34Q14147 1143 aaKnown RBP11.82□□□□□ -0.52
TUBD1-211ENST00000591548 TRADDQ15628 312 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 LILRA6Q6PI73 481 aa11.82□□□□□ -0.52
TUBD1-211ENST00000591548 SND1Q7KZF4 910 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBD1-211ENST00000591548 CCDC105Q8IYK2 499 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms