RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 UROC1Q96N76 676 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 DMAP1Q9NPF5 467 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 LZTS1Q9Y250 596 aa13.71□□□□□ -0.21
SMARCA4-216ENST00000591545 MYO1GB0I1T2 1018 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 CALB2P22676 271 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 EIF4BP23588 611 aaKnown RBP13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 PPM1AP35813 382 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 PRMT2P55345 433 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 NTRK3Q16288 839 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 AGAP9Q5VTM2 703 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 GJB7Q6PEY0 223 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 TMEM86AQ8N2M4 240 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 TAS1R2Q8TE23 839 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 TADA1Q96BN2 335 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 GAD1Q99259 594 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 C17orf80Q9BSJ5 609 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 NRXN3Q9Y4C0 1643 aa13.71□□□□□ -0.22
SMARCA4-216ENST00000591545 FOXN3O00409 490 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 CAND2O75155 1236 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 UBTFL6P0CB48 400 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 SERPINB8P50452 374 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 PMS1P54277 932 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 ST3GAL1Q11201 340 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 SV2AQ7L0J3 742 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 IFNEQ86WN2 208 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 DCLK3Q9C098 648 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 EFCAB1Q9HAE3 211 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 SCUBE2Q9NQ36 999 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 ADGRA3Q8IWK6 1321 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 FKBP6O75344 327 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 CCR1P32246 355 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 RAP1GAPP47736 663 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 SCTRP47872 440 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 FAM71DQ8N9W8 422 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 B4GALNT2Q8NHY0 566 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 AAR2Q9Y312 384 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 USP1O94782 785 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 ARIH2O95376 493 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 PON1P27169 355 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 DGKZQ13574 1117 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 RCN1Q15293 331 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 ACBD5Q5T8D3 534 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 COPS5Q92905 334 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 KLF6Q99612 283 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 PDGFDQ9GZP0 370 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 THAP2Q9H0W7 228 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 H2AFY2Q9P0M6 372 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 PAX3P23760 479 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 PLOD1Q02809 727 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 PLEKHM3Q6ZWE6 761 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 DSG4Q86SJ6 1040 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 BRSK2Q8IWQ3 736 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
SMARCA4-216ENST00000591545 ZNF541Q9H0D2 1346 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 PRR23D1E9PI22 279 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 TM9SF1O15321 606 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 PRR23D2P0DMB1 279 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 GRIK5Q16478 980 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 HIST2H2ACQ16777 129 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 HIST2H2AA3Q6FI13 130 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 SNX31Q8N9S9 440 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 PGLYRP2Q96PD5 576 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 CAMKK2Q96RR4 588 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 TMEM245Q9H330 911 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 HEY2Q9UBP5 337 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 SNCAIPQ9Y6H5 919 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 CYP11B1P15538 503 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 GRK2P25098 689 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 TBX4P57082 545 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 ZCWPW2Q504Y3 356 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 SYCP2LQ5T4T6 812 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 MRNIPQ6NTE8 343 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 MICU2Q8IYU8 434 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 SLC39A10Q9ULF5 831 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 RIC1Q4ADV7 1423 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 CES2O00748 559 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 RHOBTB1O94844 696 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 NUDT2P50583 147 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 MROH9Q5TGP6 573 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 RFWD2Q8NHY2 731 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 MDM1Q8TC05 714 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 BLOC1S5Q8TDH9 187 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 FAM111AQ96PZ2 611 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 POP1Q99575 1024 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 GIMAP4Q9NUV9 329 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 NCKAP1Q9Y2A7 1128 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 SF3B1O75533 1304 aaKnown RBP eCLIP13.69□□□□□ -0.224e-6■■■■■ 137.9
SMARCA4-216ENST00000591545 A0A087X0T9 212 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 CA12O43570 354 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 RECQL4O94761 1208 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 SGPL1O95470 568 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 FAM228BP0C875 321 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 PSMC6P62333 389 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms