RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 ZNF197O14709 1029 aa23.58■■□□□ 1.37
ACTN4-210ENST00000588618 RDXP35241 583 aaKnown RBP23.58■■□□□ 1.37
ACTN4-210ENST00000588618 ATP5C1P36542 298 aaKnown RBP23.58■■□□□ 1.37
ACTN4-210ENST00000588618 HDAC4P56524 1084 aa23.58■■□□□ 1.37
ACTN4-210ENST00000588618 EFEMP1Q12805 493 aa23.58■■□□□ 1.37
ACTN4-210ENST00000588618 ADAM15Q13444 863 aa23.58■■□□□ 1.37
ACTN4-210ENST00000588618 KRT35Q92764 455 aa23.58■■□□□ 1.37
ACTN4-210ENST00000588618 ZNF707Q96C28 371 aaPredicted RBP23.58■■□□□ 1.37
ACTN4-210ENST00000588618 SMOC2Q9H3U7 446 aa23.58■■□□□ 1.37
ACTN4-210ENST00000588618 JRKLQ9Y4A0 524 aa23.58■■□□□ 1.37
ACTN4-210ENST00000588618 EPHA5P54756 1037 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 ARHGAP15Q53QZ3 475 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 TXNRD3NBQ6F5E7 133 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 SCYL2Q6P3W7 929 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 GAREM2Q75VX8 874 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 TAC4Q86UU9 113 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 RNF34Q969K3 372 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 APOL5Q9BWW9 433 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 RRAGDQ9NQL2 400 aaPredicted RBP23.57■■□□□ 1.36
ACTN4-210ENST00000588618 TMEM51Q9NW97 253 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.57■■□□□ 1.362e-7■■■□□ 15
ACTN4-210ENST00000588618 SFMBT1Q9UHJ3 866 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 RASAL2Q9UJF2 1139 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 DNMT3LQ9UJW3 386 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.57■■□□□ 1.36
ACTN4-210ENST00000588618 BRWD1Q9NSI6 2320 aa23.57■■□□□ 1.36
ACTN4-210ENST00000588618 PRPSAP2O60256 369 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 PCK1P35558 622 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 ZFYVE27Q5T4F4 411 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 MSANTD2Q6P1R3 559 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 CYP4V2Q6ZWL3 525 aaPredicted RBP23.56■■□□□ 1.36
ACTN4-210ENST00000588618 MIB1Q86YT6 1006 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 ZNF276Q8N554 614 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 UBE2Q2Q8WVN8 375 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 HES6Q96HZ4 224 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 MARCH2Q9P0N8 246 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 MDM4O15151 490 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 DDX3YO15523 660 aaKnown RBP23.56■■□□□ 1.36
ACTN4-210ENST00000588618 TBX18O95935 607 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 IGLV3-25P01717 112 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 IL1R2P27930 398 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 MIPP30301 263 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 DNA2P51530 1060 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 CYP4F8P98187 520 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 SLC25A11Q02978 314 aaKnown RBP23.56■■□□□ 1.36
ACTN4-210ENST00000588618 HABP4Q5JVS0 413 aaKnown RBP23.56■■□□□ 1.36
ACTN4-210ENST00000588618 CES5AQ6NT32 575 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 KLHDC10Q6PID8 442 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 PGAP3Q96FM1 320 aaPredicted RBP23.56■■□□□ 1.36
ACTN4-210ENST00000588618 PEBP4Q96S96 227 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 SLITRK6Q9H5Y7 841 aa23.56■■□□□ 1.36
ACTN4-210ENST00000588618 MRPS23Q9Y3D9 190 aaKnown RBP23.56■■□□□ 1.36
ACTN4-210ENST00000588618 CTAGE9A4FU28 777 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 ENDOD1O94919 500 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 CASQ1P31415 396 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 EIF4EBP2Q13542 120 aaPredicted RBP23.55■■□□□ 1.36
ACTN4-210ENST00000588618 ODF2Q5BJF6 829 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 TXNDC8Q6A555 127 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 RHOT1Q8IXI2 618 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 UBL4BQ8N7F7 174 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 ZNF592Q92610 1267 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 NAPGQ99747 312 aaPredicted RBP23.55■■□□□ 1.36
ACTN4-210ENST00000588618 PIGVQ9NUD9 493 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 PCSK1NQ9UHG2 260 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 USP18Q9UMW8 372 aa23.55■■□□□ 1.36
ACTN4-210ENST00000588618 C2orf78A6NCI8 922 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 MIF4GDA9UHW6 222 aaKnown RBP23.54■■□□□ 1.36
ACTN4-210ENST00000588618 COCHO43405 550 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 OAS1P00973 400 aaKnown RBP23.54■■□□□ 1.36
ACTN4-210ENST00000588618 GJA1P17302 382 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 DDX6P26196 483 aaKnown RBP eCLIP23.54■■□□□ 1.363e-7■■■■□ 25.9
ACTN4-210ENST00000588618 GJC1P36383 396 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 CCR2P41597 374 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 KPNA1P52294 538 aaPredicted RBP23.54■■□□□ 1.36
ACTN4-210ENST00000588618 ITIH3Q06033 890 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 RPS6KA1Q15418 735 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 Q7L0L9 218 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 GPR149Q86SP6 731 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 MAB21L3Q8N8X9 362 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 ALG3Q92685 438 aa23.54■■□□□ 1.36
ACTN4-210ENST00000588618 CCDC66A2RUB6 948 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 IRAK2O43187 625 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 MSI1O43347 362 aaKnown RBP23.53■■□□□ 1.36
ACTN4-210ENST00000588618 PAPLNO95428 1278 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 CKMP06732 381 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 KRT7P08729 469 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 HDCP19113 662 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 CTNNA1P35221 906 aaKnown RBP23.53■■□□□ 1.36
ACTN4-210ENST00000588618 PEX5P50542 639 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 NTHL1P78549 312 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 ARL13BQ3SXY8 428 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 ATP13A4Q4VNC1 1196 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 DNTTIP2Q5QJE6 756 aaKnown RBP23.53■■□□□ 1.36
ACTN4-210ENST00000588618 FAM131BQ86XD5 332 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 DEFB123Q8N688 67 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 SHKBP1Q8TBC3 707 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 MYLIPQ8WY64 445 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 PABPC5Q96DU9 382 aaKnown RBP23.53■■□□□ 1.36
ACTN4-210ENST00000588618 PSMB7Q99436 277 aa23.53■■□□□ 1.36
ACTN4-210ENST00000588618 WDCPQ9H6R7 721 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms