RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 ADH5P11766 374 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 KRT5P13647 590 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 GNA15P30679 374 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 HOXA6P31267 233 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 GALK1P51570 392 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 GOLGA8FQ08AF8 430 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 GOLGA8DPQ0D2H9 430 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 MESP2Q0VG99 397 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 GRSF1Q12849 480 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATG4D-202ENST00000585437 TRIM14Q14142 442 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 KRT31Q15323 416 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 C10orf120Q5SQS8 335 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 LY6G5CQ5SRR4 150 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 SPECC1LQ69YQ0 1117 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 ZC3H14Q6PJT7 736 aaKnown RBP9.04□□□□□ -0.96
ATG4D-202ENST00000585437 APTXQ7Z2E3 356 aaKnown RBP9.04□□□□□ -0.96
ATG4D-202ENST00000585437 FAM217AQ8IXS0 508 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 FAM71AQ8IYT1 594 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 SIX6OS1Q8N1H7 587 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 TTC16Q8NEE8 873 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 ZNF606Q8WXB4 792 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 EXOC4Q96A65 974 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 SLC4A5Q9BY07 1137 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 NACA2Q9H009 215 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 SEMA4AQ9H3S1 761 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 LRRC4Q9HBW1 653 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 PLCB1Q9NQ66 1216 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 SPHK2Q9NRA0 654 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 ABCC13Q9NSE7 274 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 OLA1Q9NTK5 396 aaKnown RBP9.04□□□□□ -0.96
ATG4D-202ENST00000585437 CYTH4Q9UIA0 394 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 DNAJC12Q9UKB3 198 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 PCDHGC3Q9UN70 934 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 PCDHGA2Q9Y5H1 932 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 DOCK4Q8N1I0 1966 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 DMXL1Q9Y485 3027 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 RALGAPA1Q6GYQ0 2036 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 NUP205Q92621 2012 aa9.04□□□□□ -0.96
ATG4D-202ENST00000585437 K7EQS6 105 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 GFRA2O00451 464 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 THAP12O43422 761 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 MED7O43513 233 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CACNG3O60359 315 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 FBXO21O94952 628 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 IGLV3-27P01718 113 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 LTFP02788 710 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 FYNP06241 537 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 UCHL3P15374 230 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CXCL12P48061 93 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 RGS7P49802 495 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 COG7P83436 770 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CCZ1BP86790 482 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CCZ1P86791 482 aaPredicted RBP9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CSTF1Q05048 431 aaKnown RBP9.03□□□□□ -0.96
ATG4D-202ENST00000585437 GAD2Q05329 585 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 EFEMP1Q12805 493 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 TRIP4Q15650 581 aaPredicted RBP9.03□□□□□ -0.96
ATG4D-202ENST00000585437 ARHGAP44Q17R89 818 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 KLHDC7AQ5VTJ3 777 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 BSPRYQ5W0U4 402 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 DENND1BQ6P3S1 775 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 TSSK4Q6SA08 328 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 BEND5Q7L4P6 421 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 ASCL5Q7RTU5 278 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 TMEM110Q86TL2 294 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 TMEM25Q86YD3 366 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 MIB1Q86YT6 1006 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CREBRFQ8IUR6 639 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CPXM2Q8N436 756 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CLEC4CQ8WTT0 213 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 NDRG1Q92597 394 aaKnown RBP9.03□□□□□ -0.96
ATG4D-202ENST00000585437 PLD4Q96BZ4 506 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 P2RY11Q96G91 374 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 GANQ9H2C0 597 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 LHX5Q9H2C1 402 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 EPC1Q9H2F5 836 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 ZSCAN32Q9NX65 697 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 TAB2Q9NYJ8 693 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 MARCH2Q9P0N8 246 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 LIMA1Q9UHB6 759 aaKnown RBP9.03□□□□□ -0.96
ATG4D-202ENST00000585437 RASAL2Q9UJF2 1139 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 STOML2Q9UJZ1 356 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 LSM7Q9UK45 103 aaKnown RBP9.03□□□□□ -0.96
ATG4D-202ENST00000585437 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 R4GN57 208 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 DCHS1Q96JQ0 3298 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 ITIH6Q6UXX5 1313 aa9.03□□□□□ -0.96
ATG4D-202ENST00000585437 CCDC163A0A0D9SF12 145 aa9.02□□□□□ -0.97
ATG4D-202ENST00000585437 GOLGA6L9A6NEM1 432 aa9.02□□□□□ -0.97
ATG4D-202ENST00000585437 LRRC10BA6NIK2 292 aa9.02□□□□□ -0.97
ATG4D-202ENST00000585437 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.02□□□□□ -0.97
ATG4D-202ENST00000585437 F8VZ95 297 aa9.02□□□□□ -0.97
ATG4D-202ENST00000585437 FOXN3O00409 490 aaPredicted RBP9.02□□□□□ -0.97
ATG4D-202ENST00000585437 PAPSS1O43252 624 aaPredicted RBP9.02□□□□□ -0.97
ATG4D-202ENST00000585437 SART1O43290 800 aaKnown RBP9.02□□□□□ -0.97
ATG4D-202ENST00000585437 ATG13O75143 517 aa9.02□□□□□ -0.97
ATG4D-202ENST00000585437 PENKP01210 267 aaPredicted RBP9.02□□□□□ -0.97
ATG4D-202ENST00000585437 PNMA6AP0CW24 399 aaPredicted RBP9.02□□□□□ -0.97
ATG4D-202ENST00000585437 LCP1P13796 627 aa9.02□□□□□ -0.97
ATG4D-202ENST00000585437 CDH5P33151 784 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms