RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, human

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB11FIP4-210	ENST00000585058	SERHL2	Q9H4I8	314 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	SERHL	Q9NQF3	203 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ADAM30	Q9UKF2	790 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	SPATA2	Q9UM82	520 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CBX4	O00257	560 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	STAG3L1	P0CL83	205 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	KRT20	P35900	424 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	GSS	P48637	474 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	WDR93	Q6P2C0	686 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	COLGALT1	Q8NBJ5	622 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	COMMD8	Q9NX08	183 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	KIDINS220	Q9ULH0	1771 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CCNT2	O60583	730 aa	Known RBP	13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ICAM1	P05362	532 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ITGB6	P18564	788 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	NEK10	Q6ZWH5	1172 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ACTRT1	Q8TDG2	376 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	NACC2	Q96BF6	587 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	GLT1D1	Q96MS3	346 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	PRRG3	Q9BZD7	231 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	UBXN6	Q9BZV1	441 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	WDR41	Q9HAD4	459 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	AVEN	Q9NQS1	362 aa	Predicted RBP	13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	KIAA1257	Q9ULG3	409 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	MED14	O60244	1454 aa		13.62	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	KATNA1	O75449	491 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	FCGR1A	P12314	374 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	YWHAQ	P27348	245 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	PTPN4	P29074	926 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	NAMPT	P43490	491 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	RAD23A	P54725	363 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	HERVK_113	P62684	666 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	YWHAZ	P63104	245 aa	Known RBP	13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CRYM	Q14894	314 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ZNF438	Q7Z4V0	828 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	RNF180	Q86T96	592 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	NT5DC3	Q86UY8	548 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ENGASE	Q8NFI3	743 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CGRRF1	Q99675	332 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	VANGL2	Q9ULK5	521 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ZNF839	A8K0R7	811 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	MEI4	A8MW99	385 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	GPR182	O15218	404 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CAMTA2	O94983	1202 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ERVK-10	P10266	1014 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CSNK2B	P67870	215 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	BFSP2	Q13515	415 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	INA	Q16352	499 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	SAMD7	Q7Z3H4	446 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	APLF	Q8IW19	511 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CEP41	Q9BYV8	373 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	TM9SF1	O15321	606 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	PSMC6	P62333	389 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CTXN3	Q4LDR2	81 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ARMC4	Q5T2S8	1044 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	EPHX4	Q8IUS5	362 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	DAGLB	Q8NCG7	672 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	UCMA	Q8WVF2	138 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	MED8	Q96G25	268 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	MRPL48	Q96GC5	212 aa	Known RBP	13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CNPY3	Q9BT09	278 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	AAAS	Q9NRG9	546 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CSF1R	P07333	972 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CLTB	P09497	229 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	WEE1	P30291	646 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	POU6F1	Q14863	301 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	TMEM26	Q6ZUK4	368 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	TLK2	Q86UE8	772 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	DNAAF5	Q86Y56	855 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	RXFP2	Q8WXD0	754 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	GINS4	Q9BRT9	223 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	PARVB	Q9HBI1	364 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	DUSP12	Q9UNI6	340 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CRB1	P82279	1406 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	TNS3	Q68CZ2	1445 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	FAM220BP	B1ANY3	271 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	UBE2Q2L	H0YL09	131 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	PROSC	O94903	275 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	TPBGL	P0DKB5	382 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	FAM228A	Q86W67	206 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CYP4Z2P	Q8N1L4	340 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	EXD1	Q8NHP7	514 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	SPPL2A	Q8TCT8	520 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	MIEF2	Q96C03	454 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	GJD4	Q96KN9	370 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	ADGRE3	Q9BY15	652 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	KLHL3	Q9UH77	587 aa		13.61	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	EGFR	P00533	1210 aa		13.6	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	AR	P10275	920 aa		13.6	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	CYP2F1	P24903	491 aa		13.6	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	SCNN1B	P51168	640 aa		13.6	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	TMC5	Q6UXY8	1006 aa		13.6	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	LPCAT2	Q7L5N7	544 aa		13.6	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	KY	Q8NBH2	561 aa		13.6	□□□□□ -0.23
RAB11FIP4-210	ENST00000585058	TAS1R2	Q8TE23	839 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms