RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 BECN2A8MW95 431 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 FBXO21O94952 628 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 APBB3O95704 486 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 CHKAP35790 457 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 MIIPQ5JXC2 388 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 EMC10Q5UCC4 262 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 GRAMD4Q6IC98 578 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 RBM43Q6ZSC3 357 aaKnown RBP21.36■■□□□ 1.01
SS18-224ENST00000584083 PHTF2Q8N3S3 785 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 SHC3Q92529 594 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 PLD4Q96BZ4 506 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 SIX2Q9NPC8 291 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 MARK1Q9P0L2 795 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 DNAJC12Q9UKB3 198 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 AGO1Q9UL18 857 aaKnown RBP21.36■■□□□ 1.01
SS18-224ENST00000584083 EML5Q05BV3 1969 aa21.36■■□□□ 1.01
SS18-224ENST00000584083 CCDC163A0A0D9SF12 145 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 CACNG3O60359 315 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 KLF8O95600 359 aaPredicted RBP21.35■■□□□ 1.01
SS18-224ENST00000584083 MBD3O95983 291 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 LTFP02788 710 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 GPD2P43304 727 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 TCP11X2Q5H9J9 407 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 ALLCQ8N6M5 410 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 ENOX1Q8TC92 643 aaKnown RBP21.35■■□□□ 1.01
SS18-224ENST00000584083 CLEC4CQ8WTT0 213 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 PLK2Q9NYY3 685 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 MMP17Q9ULZ9 603 aa21.35■■□□□ 1.01
SS18-224ENST00000584083 HBS1LQ9Y450 684 aaKnown RBP21.35■■□□□ 1.01
SS18-224ENST00000584083 GPR179Q6PRD1 2367 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 TRIM24O15164 1050 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 AXIN1O15169 862 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 EEF1GP26641 437 aaKnown RBP21.34■■□□□ 1.01
SS18-224ENST00000584083 ACADSBP45954 432 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 HARS2P49590 506 aaKnown RBP21.34■■□□□ 1.01
SS18-224ENST00000584083 TRIP4Q15650 581 aaPredicted RBP21.34■■□□□ 1.01
SS18-224ENST00000584083 C10orf76Q5T2E6 689 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 SCUBE3Q8IX30 993 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 TERB1Q8NA31 727 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 TXNDC5Q8NBS9 432 aaKnown RBP21.34■■□□□ 1.01
SS18-224ENST00000584083 TSTD1Q8NFU3 115 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 ANO10Q9NW15 660 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 TAB2Q9NYJ8 693 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 AJAP1Q9UKB5 411 aaPredicted RBP21.34■■□□□ 1.01
SS18-224ENST00000584083 GMEB2Q9UKD1 530 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 SPAG17Q6Q759 2223 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 RALGAPA1Q6GYQ0 2036 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 GVINP1Q7Z2Y8 2422 aa21.34■■□□□ 1.01
SS18-224ENST00000584083 CFAP54Q96N23 3096 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 RPP40O75818 363 aaKnown RBP21.33■■□□□ 1.01
SS18-224ENST00000584083 CYBBP04839 570 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 KIR2DL1P43626 348 aaPredicted RBP21.33■■□□□ 1.01
SS18-224ENST00000584083 DGKGP49619 791 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 PTK2Q05397 1052 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 MEA1Q16626 185 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 HSF5Q4G112 596 aaPredicted RBP21.33■■□□□ 1.01
SS18-224ENST00000584083 LAIR1Q6GTX8 287 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 MSANTD2Q6P1R3 559 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.33■■□□□ 1.01
SS18-224ENST00000584083 KIAA2013Q8IYS2 634 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 IL17RCQ8NAC3 791 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 STK32AQ8WU08 396 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 GAB3Q8WWW8 586 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 ZDHHC4Q9NPG8 344 aa21.33■■□□□ 1.01
SS18-224ENST00000584083 FRYLO94915 3013 aa21.32■■□□□ 1
SS18-224ENST00000584083 FOXN3O00409 490 aaPredicted RBP21.32■■□□□ 1
SS18-224ENST00000584083 SART1O43290 800 aaKnown RBP21.32■■□□□ 1
SS18-224ENST00000584083 MSI1O43347 362 aaKnown RBP21.32■■□□□ 1
SS18-224ENST00000584083 DGKEP52429 567 aa21.32■■□□□ 1
SS18-224ENST00000584083 CRY1Q16526 586 aa21.32■■□□□ 1
SS18-224ENST00000584083 STX1AQ16623 288 aa21.32■■□□□ 1
SS18-224ENST00000584083 EOGTQ5NDL2 527 aa21.32■■□□□ 1
SS18-224ENST00000584083 CCDC183Q5T5S1 534 aa21.32■■□□□ 1
SS18-224ENST00000584083 ZNF513Q8N8E2 541 aaPredicted RBP21.32■■□□□ 1
SS18-224ENST00000584083 FAM149B1Q96BN6 582 aa21.32■■□□□ 1
SS18-224ENST00000584083 SLC4A5Q9BY07 1137 aa21.32■■□□□ 1
SS18-224ENST00000584083 DMDP11532 3685 aa21.32■■□□□ 1
SS18-224ENST00000584083 SDK1Q7Z5N4 2213 aa21.31■■□□□ 1
SS18-224ENST00000584083 SGK1O00141 431 aa21.31■■□□□ 1
SS18-224ENST00000584083 TPM2P07951 284 aa21.31■■□□□ 1
SS18-224ENST00000584083 NCAM1P13591 858 aa21.31■■□□□ 1
SS18-224ENST00000584083 RPL34P49207 117 aaKnown RBP21.31■■□□□ 1
SS18-224ENST00000584083 KCNMA1Q12791 1236 aa21.31■■□□□ 1
SS18-224ENST00000584083 RAPGEF1Q13905 1077 aa21.31■■□□□ 1
SS18-224ENST00000584083 ANO7Q6IWH7 933 aa21.31■■□□□ 1
SS18-224ENST00000584083 TOGARAM2Q6ZUX3 1019 aa21.31■■□□□ 1
SS18-224ENST00000584083 TRMT11Q7Z4G4 463 aaKnown RBP21.31■■□□□ 1
SS18-224ENST00000584083 PASD1Q8IV76 773 aa21.31■■□□□ 1
SS18-224ENST00000584083 CPXM2Q8N436 756 aa21.31■■□□□ 1
SS18-224ENST00000584083 KCNV2Q8TDN2 545 aa21.31■■□□□ 1
SS18-224ENST00000584083 DDI1Q8WTU0 396 aa21.31■■□□□ 1
SS18-224ENST00000584083 LSM14BQ9BX40 385 aaKnown RBP21.31■■□□□ 1
SS18-224ENST00000584083 VPS16Q9H269 839 aa21.31■■□□□ 1
SS18-224ENST00000584083 EBF1Q9UH73 591 aa21.31■■□□□ 1
SS18-224ENST00000584083 CYTH4Q9UIA0 394 aa21.31■■□□□ 1
SS18-224ENST00000584083 ZNF292O60281 2723 aa21.31■■□□□ 1
SS18-224ENST00000584083 E5RJQ4 531 aa21.3■■□□□ 1
SS18-224ENST00000584083 ALDH1A2O94788 518 aa21.3■■□□□ 1
SS18-224ENST00000584083 PENKP01210 267 aaPredicted RBP21.3■■□□□ 1
SS18-224ENST00000584083 PNMA6AP0CW24 399 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms