RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ARHGEF4Q9NR80 690 aa10.36□□□□□ -0.75
SKA2-208ENST00000583927 STOML2Q9UJZ1 356 aa10.36□□□□□ -0.75
SKA2-208ENST00000583927 NUDT5Q9UKK9 219 aa10.36□□□□□ -0.75
SKA2-208ENST00000583927 BECN2A8MW95 431 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 GFRA2O00451 464 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 MDM4O15151 490 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 HRO43593 1189 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 APBB3O95704 486 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 PENKP01210 267 aaPredicted RBP10.35□□□□□ -0.75
SKA2-208ENST00000583927 IGLV3-27P01718 113 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 LTFP02788 710 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 IRF1P10914 325 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 TYRP14679 529 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 GNA15P30679 374 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 FNTBP49356 437 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 DGKEP52429 567 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 RING1Q06587 406 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 DMWDQ09019 674 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 MESP2Q0VG99 397 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 EFEMP1Q12805 493 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 DMC1Q14565 340 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 ANO4Q32M45 955 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 TCP11X2Q5H9J9 407 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 RSRC2Q7L4I2 434 aaKnown RBP10.35□□□□□ -0.75
SKA2-208ENST00000583927 TMEM110Q86TL2 294 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 RASSF3Q86WH2 238 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 MIB1Q86YT6 1006 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 IL17RCQ8NAC3 791 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 RNF139Q8WU17 664 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 GAB3Q8WWW8 586 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 AZIN2Q96A70 460 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 LOXL4Q96JB6 756 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 ZC3H10Q96K80 434 aaKnown RBP10.35□□□□□ -0.75
SKA2-208ENST00000583927 TRIM62Q9BVG3 475 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 BBS2Q9BXC9 721 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 LHX5Q9H2C1 402 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 RASAL2Q9UJF2 1139 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 RAB23Q9ULC3 237 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 PCDHGC3Q9UN70 934 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 SLC27A6Q9Y2P4 619 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 DAAM1Q9Y4D1 1078 aa10.35□□□□□ -0.75
SKA2-208ENST00000583927 NYNRINQ9P2P1 1898 aaKnown RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 SLC12A8A0AV02 714 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 KCNJ18B7U540 433 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 SCAMP3O14828 347 aaKnown RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 NPC1O15118 1278 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 LETM1O95202 739 aaPredicted RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 RETP07949 1114 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 CISD3P0C7P0 127 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 KRT5P13647 590 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 LCP1P13796 627 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 CORO1AP31146 461 aaKnown RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 HARS2P49590 506 aaKnown RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 BPIFB4P59827 614 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 SIM2Q14190 667 aaPredicted RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 KCNJ12Q14500 433 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 E2F5Q15329 346 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 CRY1Q16526 586 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 EOGTQ5NDL2 527 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 CDKAL1Q5VV42 579 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 FYB2Q5VWT5 728 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 RNF43Q68DV7 783 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 CREBRFQ8IUR6 639 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 FMNL3Q8IVF7 1028 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 SLC2A11Q9BYW1 496 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 PLCB1Q9NQ66 1216 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 SAMSN1Q9NSI8 373 aaKnown RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 AGO1Q9UL18 857 aaKnown RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 NFE2L3Q9Y4A8 694 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 CACNA1EQ15878 2313 aa10.34□□□□□ -0.75
SKA2-208ENST00000583927 MUC22E2RYF6 1773 aaPredicted RBP10.34□□□□□ -0.75
SKA2-208ENST00000583927 TBC1D3BA6NDS4 549 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 NEDD8-MDP1E9PL57 170 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 AXIN1O15169 862 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 FOXD2O60548 495 aaPredicted RBP10.33□□□□□ -0.76
SKA2-208ENST00000583927 FYNP06241 537 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 GLI1P08151 1106 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 HNRNPLP14866 589 aaKnown RBP eCLIP10.33□□□□□ -0.76
SKA2-208ENST00000583927 TGM1P22735 817 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 CLCN1P35523 988 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 DGKGP49619 791 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 RGS7P49802 495 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 PTK2Q05397 1052 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 KCNMA1Q12791 1236 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 ARHGAP44Q17R89 818 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 C2orf27AQ580R0 203 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 MPP7Q5T2T1 576 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 ADGRF1Q5T601 910 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 KLHDC7AQ5VTJ3 777 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 NUGGCQ68CJ6 796 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 GRAMD4Q6IC98 578 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 GJB7Q6PEY0 223 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 TPGS1Q6ZTW0 290 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 CACNA2D4Q7Z3S7 1137 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 C11orf74Q86VG3 221 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 UNC45BQ8IWX7 931 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 FAM71AQ8IYT1 594 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 NAT16Q8N8M0 369 aa10.33□□□□□ -0.76
SKA2-208ENST00000583927 NDRG1Q92597 394 aaKnown RBP10.33□□□□□ -0.76
SKA2-208ENST00000583927 GOLGA1Q92805 767 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms