RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 TULP3O75386 442 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 GJB3O75712 270 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 GCNT3O95395 438 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 BMP15O95972 392 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 CST3P01034 146 aaPredicted RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 IL2RAP01589 272 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 TMEM191BP0C7N4 346 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 MBL2P11226 248 aaPredicted RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 HOXB2P14652 356 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 GNSP15586 552 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 GAP43P17677 238 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 PTPN1P18031 435 aaKnown RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 WARSP23381 471 aaKnown RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 MSX1P28360 303 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 NTSR1P30989 418 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 GNL1P36915 607 aaPredicted RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 DGKGP49619 791 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 CTBSQ01459 385 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 KDSRQ06136 332 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 DUOXA2Q1HG44 320 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 COL28A1Q2UY09 1125 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 PLEKHG6Q3KR16 790 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 SDE2Q6IQ49 451 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 USP49Q70CQ1 688 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 HS2ST1Q7LGA3 356 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 GLRX5Q86SX6 157 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 PDZD3Q86UT5 571 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 TMEM25Q86YD3 366 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 SLC41A1Q8IVJ1 513 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 RGL4Q8IZJ4 473 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 SYCP3Q8IZU3 236 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 NUP93Q8N1F7 819 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 PNPLA1Q8N8W4 532 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 PDZD8Q8NEN9 1154 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 OR5B17Q8NGF7 314 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 OR2I1PQ8NGU4 316 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 OR6B3Q8NGW1 331 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 DNAJC19Q96DA6 116 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 ANKRD36BP1Q96IX9 119 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 EPSTI1Q96J88 318 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 FAM84AQ96KN4 292 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 MMS19Q96T76 1030 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 KIF2CQ99661 725 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 DUSP9Q99956 384 aaKnown RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 MRPL45Q9BRJ2 306 aaKnown RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 CBWD1Q9BRT8 395 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 MTMR12Q9C0I1 747 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 PCIF1Q9H4Z3 704 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 CCDC86Q9H6F5 360 aaKnown RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 SPHK2Q9NRA0 654 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 INTS13Q9NVM9 706 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 TBC1D7Q9P0N9 293 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 KIAA1522Q9P206 1035 aaPredicted RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 CHORDC1Q9UHD1 332 aaPredicted RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 CNOT1A5YKK6 2376 aaKnown RBP5.65□□□□□ -1.5
VAPA-207ENST00000583879 ZNF233A6NK53 670 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 TRIM24O15164 1050 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 BNIP3LO60238 219 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 LZTS3O60299 673 aaPredicted RBP5.65□□□□□ -1.5
VAPA-207ENST00000583879 CBFA2T3O75081 653 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 NDUFS2O75306 463 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 TACC1O75410 805 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 TNNC2P02585 160 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 FTH1P19P0C7X4 201 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 ARAFP10398 606 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 ITGB7P26010 798 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 MAOBP27338 520 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 YWHAQP27348 245 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 GJB2P29033 226 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 WASP42768 502 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 CASP5P51878 434 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 CACNA2D1P54289 1103 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 ALCAMQ13740 583 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 SF3A1Q15459 793 aaKnown RBP5.65□□□□□ -1.5
VAPA-207ENST00000583879 SURF1Q15526 300 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 ANO4Q32M45 955 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 C4orf17Q53FE4 359 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 OXLD1Q5BKU9 147 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 MDH1BQ5I0G3 518 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 C10orf76Q5T2E6 689 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 HECTD3Q5T447 861 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 SYCP2LQ5T4T6 812 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 SNX30Q5VWJ9 437 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 RRAGBQ5VZM2 374 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 TOGARAM2Q6ZUX3 1019 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 SV2BQ7L1I2 683 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 TRAPPC11Q7Z392 1133 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 SLCO6A1Q86UG4 719 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 MIB1Q86YT6 1006 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 NAXDQ8IW45 347 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 BBS7Q8IWZ6 715 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 CHPFQ8IZ52 775 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 GPD1LQ8N335 351 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 TERB1Q8NA31 727 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 IPO4Q8TEX9 1081 aaKnown RBP5.65□□□□□ -1.5
VAPA-207ENST00000583879 NOC3LQ8WTT2 800 aaKnown RBP5.65□□□□□ -1.5
VAPA-207ENST00000583879 HNRNPLLQ8WVV9 542 aaKnown RBP5.65□□□□□ -1.5
VAPA-207ENST00000583879 OVCA2Q8WZ82 227 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 FBXO32Q969P5 355 aa5.65□□□□□ -1.5
VAPA-207ENST00000583879 HSPA12BQ96MM6 686 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms