RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ERCC4Q92889 916 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 BHMTQ93088 406 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TSG101Q99816 390 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 GABRG3Q99928 467 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PLK2Q9NYY3 685 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CALCOCO1Q9P1Z2 691 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 EVLQ9UI08 416 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 RASAL2Q9UJF2 1139 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TRIM49BA6NDI0 452 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 SMC2O95347 1197 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PENKP01210 267 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 COG7P83436 770 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 LRRC63Q05C16 580 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 EFEMP1Q12805 493 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CUL2Q13617 745 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 GOLGA7BQ2TAP0 167 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 SPDYCQ5MJ68 293 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 LYSMD4Q5XG99 296 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 KIAA1211LQ6NV74 962 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 SYT12Q8IV01 421 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ARHGAP18Q8N392 663 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 SLC35C1Q96A29 364 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TMEM9BQ9NQ34 198 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 FBXO10Q9UK96 956 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ZNF510Q9Y2H8 683 aa17.46■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ATXN2Q99700 1313 aaKnown RBP17.46■□□□□ 0.38
CDK5RAP3-206ENST00000578018 GOLGA6L4A6NEF3 574 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 CDX4O14627 284 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 HMBSP08397 361 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 NDUFV2P19404 249 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 CORO1AP31146 461 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 TKTL1P51854 596 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 YWHAGP61981 247 aaKnown RBP eCLIP17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 IRX4P78413 519 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 NUCB2P80303 420 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 TRIM61Q5EBN2 209 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 FYB2Q5VWT5 728 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 PEAR1Q5VY43 1037 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 PSAPL1Q6NUJ1 521 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 BHLHA9Q7RTU4 235 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 IPO4Q8TEX9 1081 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 DCLK3Q9C098 648 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 TMEM74BQ9NUR3 256 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 MARCH2Q9P0N8 246 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 TSPAN16Q9UKR8 245 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SLC27A6Q9Y2P4 619 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 CKAP5Q14008 2032 aa17.45■□□□□ 0.38
CDK5RAP3-206ENST00000578018 TULP2O00295 520 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 AP5Z1O43299 807 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 ZBED1O96006 694 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 CHKAP35790 457 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 DPP6P42658 865 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 NOVA1P51513 510 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 BCAT1P54687 386 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 MFAP3P55082 362 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SLC8A3P57103 927 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 PDE4CQ08493 712 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 DAB2IPQ5VWQ8 1189 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 PM20D1Q6GTS8 502 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SDE2Q6IQ49 451 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 RSRC2Q7L4I2 434 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 UBR7Q8N806 425 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 ULBP1Q9BZM6 244 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 CACNA2D2Q9NY47 1150 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 ARMCX3Q9UH62 379 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 PILRBQ9UKJ0 227 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 ANGPTL2Q9UKU9 493 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 AGO1Q9UL18 857 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 STRIP2Q9ULQ0 834 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 RAD54BQ9Y620 910 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 ADAMTS9Q9P2N4 1935 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 PCDH15Q96QU1 1955 aa17.44■□□□□ 0.38
CDK5RAP3-206ENST00000578018 IGHV1OR15-9A0A0B4J2B8 117 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 GFRA2O00451 464 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 XPO1O14980 1071 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 ITPKAP23677 461 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 HOXD12P35452 270 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SHC2P98077 582 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 RPL6Q02878 288 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 BST2Q10589 180 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 LMAN2Q12907 356 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SGO2Q562F6 1265 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SLC23A3Q6PIS1 610 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SLC36A4Q6YBV0 504 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 DENND1CQ8IV53 801 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 ERLEC1Q96DZ1 483 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 TIGD1Q96MW7 591 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 GTPBP4Q9BZE4 634 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 IGF2RP11717 2491 aa17.43■□□□□ 0.38
CDK5RAP3-206ENST00000578018 FRYQ5TBA9 3013 aa17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 PCNX2A6NKB5 2137 aa17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 SLC12A8A0AV02 714 aa17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 O00370 1275 aa17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 PSMA7O14818 248 aa17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 GIPC1O14908 333 aa17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 ZNF217O75362 1048 aa17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 CD19P15391 556 aa17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 TBXAS1P24557 533 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-206ENST00000578018 YWHAEP62258 255 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms