RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 GNL1P36915 607 aaPredicted RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SAMD4BQ5PRF9 694 aaKnown RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 TAF2Q6P1X5 1199 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SLC7A14Q8TBB6 771 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 VPS50Q96JG6 964 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 GCNAQ96QF7 691 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 CDRT15Q96T59 188 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 DDX18Q9NVP1 670 aaKnown RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 DPP3Q9NY33 737 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 ERAP1Q9NZ08 941 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 GRHL1Q9NZI5 618 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 VPS9D1Q9Y2B5 631 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 SUPT7LO94864 414 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 NOMO3P69849 1222 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 CHRNB3Q05901 458 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 DCAF4L1Q3SXM0 396 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 EFCAB12Q6NXP0 572 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 PATL1Q86TB9 770 aaKnown RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 SNX32Q86XE0 403 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 TRPC4APQ8TEL6 797 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 DGCR14Q96DF8 476 aaKnown RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 ATG4CQ96DT6 458 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 RMDN2Q96LZ7 410 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 ATXN10Q9UBB4 475 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 CROTQ9UKG9 612 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 PRPF19Q9UMS4 504 aaKnown RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 STXBP5LQ9Y2K9 1186 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 ANKRD63C9JTQ0 380 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 HMGCRP04035 888 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 ADRB2P07550 413 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 PDGFRBP09619 1106 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 CYP2C9P11712 490 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 ZNF23P17027 643 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 DALRD3Q5D0E6 543 aaKnown RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 TTC27Q6P3X3 843 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 HTR3CQ8WXA8 447 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 GPATCH2LQ9NWQ4 482 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 VANGL2Q9ULK5 521 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 AKAP12Q02952 1782 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 BCL9LQ86UU0 1499 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 ASTN2O75129 1339 aaPredicted RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 A0A096LPK6 155 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 A0A0B4J269 797 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 NDUFS3O75489 264 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 SOAT2O75908 522 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 KRT75O95678 551 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 FESP07332 822 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 SNHG28P0DPA3 235 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 AGKQ53H12 422 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 DHFR2Q86XF0 187 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 SCN4BQ8IWT1 228 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 LRRC71Q8N4P6 559 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 USP33Q8TEY7 942 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 PDCD6IPQ8WUM4 868 aaKnown RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 OSCP1Q8WVF1 389 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 SLC25A23Q9BV35 468 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 LRRC4CQ9HCJ2 640 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 SARS2Q9NP81 518 aaKnown RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 IARS2Q9NSE4 1012 aaKnown RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 ZDHHC18Q9NUE0 388 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 ADAM28Q9UKQ2 775 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 TMCO1Q9UM00 188 aa10.66□□□□□ -0.7
PTPRM-205ENST00000577827 UBQLN1Q9UMX0 589 aaKnown RBP10.66□□□□□ -0.7
PTPRM-205ENST00000577827 CCDC78A2IDD5 438 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 TBC1D12O60347 775 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 MOCS2O96007 188 aaPredicted RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 XPAP23025 273 aaPredicted RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 NPY2RP49146 381 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 SLC26A2P50443 739 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 C16orf72Q14CZ0 275 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 DGKDQ16760 1214 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 Q3C1V9 767 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 SEZ6Q53EL9 994 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 TBCELQ5QJ74 424 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 STYK1Q6J9G0 422 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 ANGPTL8Q6UXH0 198 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 MICU2Q8IYU8 434 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 TUBGCP3Q96CW5 907 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 SGF29Q96ES7 293 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 C9orf16Q9BUW7 83 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 IL1RL2Q9HB29 575 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 BARX2Q9UMQ3 279 aaPredicted RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 XRN1Q8IZH2 1706 aaKnown RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 KPNA4O00629 521 aaPredicted RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 NFIBO00712 420 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 FANCGO15287 622 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 MAP3K6O95382 1288 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 BCL10O95999 233 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 GH1P01241 217 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 UQCRBP14927 111 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 SP100P23497 879 aaPredicted RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 PCSK1P29120 753 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 PGM5Q15124 567 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 PLEKHA7Q6IQ23 1121 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 WDR60Q8WVS4 1066 aa10.65□□□□□ -0.7
PTPRM-205ENST00000577827 ZNF317Q96PQ6 595 aaPredicted RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 DHX33Q9H6R0 707 aaKnown RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 DDX4Q9NQI0 724 aaKnown RBP10.65□□□□□ -0.7
PTPRM-205ENST00000577827 ETNK2Q9NVF9 386 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms