RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 ZXDBP98169 803 aa13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 DENND1BQ6P3S1 775 aa13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 SCD5Q86SK9 330 aa13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 DDX42Q86XP3 938 aaKnown RBP eCLIP13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 CDK5RAP1Q96SZ6 601 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 FAM83CQ9BQN1 747 aa13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 ST7Q9NRC1 585 aa13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 GKN1Q9NS71 199 aa13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 GTSE1Q9NYZ3 720 aa13.13□□□□□ -0.31
NSMCE1-214ENST00000569236 COL4A2P08572 1712 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 A0A087X0T9 212 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 PIK3R2O00459 728 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 TBX18O95935 607 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 FAM228BP0C875 321 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 CYP11B1P15538 503 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 STARD6P59095 220 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 TUBB4BP68371 445 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 PDGFRLQ15198 375 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 C10orf120Q5SQS8 335 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 C10orf76Q5T2E6 689 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 KLHDC10Q6PID8 442 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 TPRG1Q6ZUI0 275 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 SCML4Q8N228 414 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 ZNF276Q8N554 614 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 STK32AQ8WU08 396 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 OSCP1Q8WVF1 389 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 PDCL3Q9H2J4 239 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 DUS2Q9NX74 493 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 CFAP97Q9P2B7 532 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 NUDT5Q9UKK9 219 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 PIAS3Q9Y6X2 628 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 FBXO21O94952 628 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 FERP16591 822 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 ACADSBP45954 432 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 IFNAR2P48551 515 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 KPNA1P52294 538 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 DAOAP59103 153 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 ARID5AQ03989 594 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 TNK2Q07912 1038 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 ITPRIPL2Q3MIP1 535 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 BTBD8Q5XKL5 378 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 PASD1Q8IV76 773 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 NDRG1Q92597 394 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 GOLGA1Q92805 767 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 ALS2CR12Q96Q35 445 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 LHX5Q9H2C1 402 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 EBF3Q9H4W6 596 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 ADAMTS1Q9UHI8 967 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 DNMT3LQ9UJW3 386 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 SH3BP1Q9Y3L3 701 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 JRKLQ9Y4A0 524 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 CEP83Q9Y592 693 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 WNT6Q9Y6F9 365 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 CAPN6Q9Y6Q1 641 aa13.12□□□□□ -0.31
NSMCE1-214ENST00000569236 YJEFN3A6XGL0 299 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 E7ENQ6 273 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 GABBR2O75899 941 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 GFPT2O94808 682 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 ATP1A1P05023 1023 aaKnown RBP13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 GLULP15104 373 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 H2AFXP16104 143 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 SOX5P35711 763 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 STAT1P42224 750 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 RPL34P49207 117 aaKnown RBP13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 CLCN5P51795 746 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 MLLT6P55198 1093 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 PDCLQ13371 301 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 RUNX3Q13761 415 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 ASTLQ6HA08 431 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 FBXO38Q6PIJ6 1188 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 ZNF852Q6ZMS4 543 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 ZNF571Q7Z3V5 609 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 KIAA1958Q8N8K9 716 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 ATP2A3Q93084 1043 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 NOX5Q96PH1 765 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 SLC4A5Q9BY07 1137 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 MIS12Q9H081 205 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 NENFQ9UMX5 172 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 SAR1BQ9Y6B6 198 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
NSMCE1-214ENST00000569236 KANSL1LA0AUZ9 987 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 BTNL10A8MVZ5 291 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 ENC1O14682 589 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 SLC9A3R1O14745 358 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 MDM4O15151 490 aa13.1□□□□□ -0.31
NSMCE1-214ENST00000569236 AOC1P19801 751 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms