RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	HBS1L	Q9Y450	684 aa	Known RBP	10.85	□□□□□ -0.67
UBR1-207	ENST00000568782	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.85	□□□□□ -0.67
UBR1-207	ENST00000568782		A0A0A0MRY4	1105 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	RNF225	M0QZC1	329 aa	Predicted RBP	10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	TULP2	O00295	520 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	RHOBTB1	O94844	696 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	KLF8	O95600	359 aa	Predicted RBP	10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	LTF	P02788	710 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	RET	P07949	1114 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	SLC9A1	P19634	815 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	GBP1	P32455	592 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	KRT9	P35527	623 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	PXN	P49023	591 aa	Predicted RBP	10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	SLC11A2	P49281	568 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	DAOA	P59103	153 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	CRY1	Q16526	586 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	DPCR1	Q3MIW9	517 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	NAIF1	Q69YI7	327 aa	Predicted RBP	10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	PMF1	Q6P1K2	205 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	PKN3	Q6P5Z2	889 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	FMNL3	Q8IVF7	1028 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	TERB1	Q8NA31	727 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	ZNF606	Q8WXB4	792 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	TFAP2B	Q92481	460 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	EDEM1	Q92611	657 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	KAT5	Q92993	513 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	BHMT	Q93088	406 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	SPACA7	Q96KW9	195 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	MIS12	Q9H081	205 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	ANO10	Q9NW15	660 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	MARK1	Q9P0L2	795 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	EBF1	Q9UH73	591 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	THADA	Q6YHU6	1953 aa		10.84	□□□□□ -0.67
UBR1-207	ENST00000568782	RIF1	Q5UIP0	2472 aa	Known RBP	10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	EML5	Q05BV3	1969 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	YJEFN3	A6XGL0	299 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	PRR5-ARHGAP8	B1AHC4	643 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	KCNJ18	B7U540	433 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782		E7ENQ6	273 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	PIK3R2	O00459	728 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	MAP3K13	O43283	966 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	HR	O43593	1189 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	CACNG3	O60359	315 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	LRP3	O75074	770 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	NCAM1	P13591	858 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	CDK11B	P21127	795 aa	Known RBP	10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	EEF1G	P26641	437 aa	Known RBP	10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	PON1	P27169	355 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	NTSR1	P30989	418 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	ID4	P47928	161 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	ARHGAP8	P85298	464 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	LMNB2	Q03252	620 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	KCNJ12	Q14500	433 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	MEA1	Q16626	185 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	PKDCC	Q504Y2	493 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	MPPE1	Q53F39	396 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	HSP90AA4P	Q58FG1	418 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	FKBP15	Q5T1M5	1219 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	NUGGC	Q68CJ6	796 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	ANO7	Q6IWH7	933 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782		Q6ZNB5	142 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	C12orf40	Q86WS4	652 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	ETFBKMT	Q8IXQ9	262 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	CHPF	Q8IZ52	775 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	CPXM2	Q8N436	756 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	DCLK2	Q8N568	766 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	ALLC	Q8N6M5	410 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	ZNF557	Q8N988	423 aa	Predicted RBP	10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	STK32A	Q8WU08	396 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	LOXL4	Q96JB6	756 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	KREMEN1	Q96MU8	473 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	SERPINB11	Q96P15	392 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	NAT10	Q9H0A0	1025 aa	Known RBP	10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	SYNC	Q9H7C4	482 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	PLK2	Q9NYY3	685 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	SFMBT1	Q9UHJ3	866 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	SLC12A6	Q9UHW9	1150 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	DNAJC12	Q9UKB3	198 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	AGO1	Q9UL18	857 aa	Known RBP	10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	CNTN6	Q9UQ52	1028 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	NFE2L3	Q9Y4A8	694 aa		10.83	□□□□□ -0.68
UBR1-207	ENST00000568782	NPC1	O15118	1278 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	LATS1	O95835	1130 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	HOXB2	P14652	356 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	ZNF132	P52740	706 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	DMWD	Q09019	674 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	RAPGEF1	Q13905	1077 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	STARD3	Q14849	445 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	TRIP4	Q15650	581 aa	Predicted RBP	10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	GAB4	Q2WGN9	574 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	TCP11X2	Q5H9J9	407 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	ADGRF1	Q5T601	910 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	SCUBE3	Q8IX30	993 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	C12orf50	Q8NA57	414 aa	Predicted RBP	10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	IL17RC	Q8NAC3	791 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	MSANTD4	Q8NCY6	345 aa		10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	ENOX1	Q8TC92	643 aa	Known RBP	10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	IPO4	Q8TEX9	1081 aa	Known RBP	10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	NDRG1	Q92597	394 aa	Known RBP	10.82	□□□□□ -0.68
UBR1-207	ENST00000568782	WBP2	Q969T9	261 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms