RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 MSANTD2Q6P1R3 559 aa30.75■■■□□ 2.51
RAB40C-211ENST00000568586 PRR23BQ6ZRT6 265 aa30.75■■■□□ 2.51
RAB40C-211ENST00000568586 TPGS1Q6ZTW0 290 aa30.75■■■□□ 2.51
RAB40C-211ENST00000568586 NUDT18Q6ZVK8 323 aa30.75■■■□□ 2.51
RAB40C-211ENST00000568586 RASSF3Q86WH2 238 aa30.75■■■□□ 2.51
RAB40C-211ENST00000568586 CREBRFQ8IUR6 639 aa30.75■■■□□ 2.51
RAB40C-211ENST00000568586 CPXM2Q8N436 756 aa30.75■■■□□ 2.51
RAB40C-211ENST00000568586 SLC12A8A0AV02 714 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 LRP3O75074 770 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 RPP40O75818 363 aaKnown RBP30.74■■■□□ 2.51
RAB40C-211ENST00000568586 FBXO21O94952 628 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 CISD3P0C7P0 127 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 KRT5P13647 590 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 LCP1P13796 627 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 CORO1AP31146 461 aaKnown RBP30.74■■■□□ 2.51
RAB40C-211ENST00000568586 DGKEP52429 567 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 GRAMD4Q6IC98 578 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 GJB7Q6PEY0 223 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 KIAA2013Q8IYS2 634 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 CCDC33Q8N5R6 958 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 ALLCQ8N6M5 410 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 GPT2Q8TD30 523 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 ZNF606Q8WXB4 792 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 SHC3Q92529 594 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 DNAJC17Q9NVM6 304 aaKnown RBP30.74■■■□□ 2.51
RAB40C-211ENST00000568586 HCN2Q9UL51 889 aa30.74■■■□□ 2.51
RAB40C-211ENST00000568586 BECN2A8MW95 431 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 TRIM24O15164 1050 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 MIIPQ5JXC2 388 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 FYB2Q5VWT5 728 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 FMNL3Q8IVF7 1028 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 TSTD1Q8NFU3 115 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 RNF139Q8WU17 664 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 ZC3H10Q96K80 434 aaKnown RBP30.73■■■□□ 2.51
RAB40C-211ENST00000568586 SIX2Q9NPC8 291 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 STOML2Q9UJZ1 356 aa30.73■■■□□ 2.51
RAB40C-211ENST00000568586 SGK1O00141 431 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 MED7O43513 233 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 ADAM23O75077 832 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 KLF8O95600 359 aaPredicted RBP30.72■■■□□ 2.51
RAB40C-211ENST00000568586 HMBSP08397 361 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 TIE1P35590 1138 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 APBA1Q02410 837 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 LPAL2Q16609 132 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 EOGTQ5NDL2 527 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 DPY19L2P1Q6NXN4 242 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 TMEM92Q6UXU6 159 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 CEP68Q76N32 757 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 CACNA2D4Q7Z3S7 1137 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 FAM160A2Q8N612 972 aaPredicted RBP30.72■■■□□ 2.51
RAB40C-211ENST00000568586 TXNDC5Q8NBS9 432 aaKnown RBP30.72■■■□□ 2.51
RAB40C-211ENST00000568586 EDEM1Q92611 657 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 LOXL4Q96JB6 756 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 SLC4A5Q9BY07 1137 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 NDST4Q9H3R1 872 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 SLC27A6Q9Y2P4 619 aa30.72■■■□□ 2.51
RAB40C-211ENST00000568586 MYO18AQ92614 2054 aaKnown RBP30.71■■■□□ 2.51
RAB40C-211ENST00000568586 HNRNPLP14866 589 aaKnown RBP eCLIP30.71■■■□□ 2.51
RAB40C-211ENST00000568586 VWA3BQ502W6 1294 aa30.71■■■□□ 2.51
RAB40C-211ENST00000568586 DENND1BQ6P3S1 775 aa30.71■■■□□ 2.51
RAB40C-211ENST00000568586 DENND1CQ8IV53 801 aa30.71■■■□□ 2.51
RAB40C-211ENST00000568586 TUBGCP2Q9BSJ2 902 aa30.71■■■□□ 2.51
RAB40C-211ENST00000568586 EML5Q05BV3 1969 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 GFRA2O00451 464 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 LETM1O95202 739 aaPredicted RBP30.7■■■□□ 2.51
RAB40C-211ENST00000568586 LATS1O95835 1130 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 LTFP02788 710 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 GNA15P30679 374 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 ACADSBP45954 432 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 C10orf76Q5T2E6 689 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 BEND5Q7L4P6 421 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 TRMT11Q7Z4G4 463 aaKnown RBP30.7■■■□□ 2.51
RAB40C-211ENST00000568586 PARD6AQ9NPB6 346 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 SFMBT1Q9UHJ3 866 aa30.7■■■□□ 2.51
RAB40C-211ENST00000568586 SPAG17Q6Q759 2223 aa30.69■■■□□ 2.5
RAB40C-211ENST00000568586 IGLV3-27P01718 113 aa30.69■■■□□ 2.5
RAB40C-211ENST00000568586 HARS2P49590 506 aaKnown RBP30.69■■■□□ 2.5
RAB40C-211ENST00000568586 DGKGP49619 791 aa30.69■■■□□ 2.5
RAB40C-211ENST00000568586 TMEM110Q86TL2 294 aa30.69■■■□□ 2.5
RAB40C-211ENST00000568586 ZNF513Q8N8E2 541 aaPredicted RBP30.69■■■□□ 2.5
RAB40C-211ENST00000568586 ENOX1Q8TC92 643 aaKnown RBP30.69■■■□□ 2.5
RAB40C-211ENST00000568586 CLEC4CQ8WTT0 213 aa30.69■■■□□ 2.5
RAB40C-211ENST00000568586 ACP6Q9NPH0 428 aa30.69■■■□□ 2.5
RAB40C-211ENST00000568586 CACNA1AO00555 2505 aa30.69■■■□□ 2.5
RAB40C-211ENST00000568586 PRRT4C9JH25 899 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 PIK3R2O00459 728 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 SART1O43290 800 aaKnown RBP30.68■■■□□ 2.5
RAB40C-211ENST00000568586 FYNP06241 537 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 ARHGAP44Q17R89 818 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 TOGARAM2Q6ZUX3 1019 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.68■■■□□ 2.5
RAB40C-211ENST00000568586 KBTBD6Q86V97 674 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 SCUBE3Q8IX30 993 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 OLIG1Q8TAK6 271 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 SAMSN1Q9NSI8 373 aaKnown RBP30.68■■■□□ 2.5
RAB40C-211ENST00000568586 CYTH4Q9UIA0 394 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 DNAH14Q0VDD8 3507 aa30.68■■■□□ 2.5
RAB40C-211ENST00000568586 THAP12O43422 761 aa30.67■■■□□ 2.5
RAB40C-211ENST00000568586 EEF1GP26641 437 aaKnown RBP30.67■■■□□ 2.5
RAB40C-211ENST00000568586 RING1Q06587 406 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms