RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 AGO1Q9UL18 857 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 SLC27A6Q9Y2P4 619 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 PCDHGA5Q9Y5G8 931 aa12.79□□□□□ -0.36
NSMCE1-204ENST00000563273 SLC12A8A0AV02 714 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 YJEFN3A6XGL0 299 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 PRR5-ARHGAP8B1AHC4 643 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 E7ENQ6 273 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 NEDD8-MDP1E9PL57 170 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 GABBR2O75899 941 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 CISD3P0C7P0 127 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 GPD2P43304 727 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 MTIF2P46199 727 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 SEC13P55735 322 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 ARHGAP8P85298 464 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 KDSRQ06136 332 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 RING1Q06587 406 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 SRSF5Q13243 272 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 E2F5Q15329 346 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 TPD52L1Q16890 204 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 RBM43Q6ZSC3 357 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 FMNL3Q8IVF7 1028 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 SFTPA1Q8IWL2 248 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 FAM160A2Q8N612 972 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 NAT16Q8N8M0 369 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 TXNDC5Q8NBS9 432 aaKnown RBP12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 RNF139Q8WU17 664 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 SHC3Q92529 594 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 TRIM62Q9BVG3 475 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 SLC2A11Q9BYW1 496 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 POLMQ9NP87 494 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 DMXL1Q9Y485 3027 aa12.78□□□□□ -0.36
NSMCE1-204ENST00000563273 SGK1O00141 431 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 GFRA2O00451 464 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 NPC1O15118 1278 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 ADAM23O75077 832 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 EPN2O95208 641 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 KLF8O95600 359 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 IGLV3-27P01718 113 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 CYBBP04839 570 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 KRT5P13647 590 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 PON1P27169 355 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 HOXC13P31276 330 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 TIE1P35590 1138 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 ID4P47928 161 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 PXNP49023 591 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 DGKGP49619 791 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 FOXK2Q01167 660 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 NNTQ13423 1086 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 CSRP2Q16527 193 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 USP39Q53GS9 565 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 C10orf76Q5T2E6 689 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 FYB2Q5VWT5 728 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 TMEM92Q6UXU6 159 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 TPGS1Q6ZTW0 290 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 ERMP1Q7Z2K6 904 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 ZNF513Q8N8E2 541 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 OLIG1Q8TAK6 271 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 ZNF606Q8WXB4 792 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 NDRG1Q92597 394 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 GOLGA1Q92805 767 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 AZIN2Q96A70 460 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 CRACR2AQ9BSW2 395 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 NDST4Q9H3R1 872 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 POLR3BQ9NW08 1133 aaPredicted RBP12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 DLL3Q9NYJ7 618 aa12.77□□□□□ -0.37
NSMCE1-204ENST00000563273 BECN2A8MW95 431 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 RHOBTB1O94844 696 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 LTFP02788 710 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 LCP1P13796 627 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 SLC9A1P19634 815 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 GNA15P30679 374 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 NTSR1P30989 418 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 RGS7P49802 495 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 PUM1Q14671 1186 aaKnown RBP eCLIP12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 LPAL2Q16609 132 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 PLK5Q496M5 336 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 VWA3BQ502W6 1294 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 EMC10Q5UCC4 262 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 RNF43Q68DV7 783 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 TMEM110Q86TL2 294 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 KBTBD6Q86V97 674 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 DENND1CQ8IV53 801 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 UNC45BQ8IWX7 931 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 CCDC33Q8N5R6 958 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 TUBGCP2Q9BSJ2 902 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 PARD6AQ9NPB6 346 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 SIX2Q9NPC8 291 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 SEMA4GQ9NTN9 838 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 HCN2Q9UL51 889 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 PCDHGC3Q9UN70 934 aa12.76□□□□□ -0.37
NSMCE1-204ENST00000563273 PRRT4C9JH25 899 aa12.75□□□□□ -0.37
NSMCE1-204ENST00000563273 GOLGA6L22H0YM25 854 aa12.75□□□□□ -0.37
NSMCE1-204ENST00000563273 TRIM24O15164 1050 aa12.75□□□□□ -0.37
NSMCE1-204ENST00000563273 LETM1O95202 739 aaPredicted RBP12.75□□□□□ -0.37
NSMCE1-204ENST00000563273 HMBSP08397 361 aa12.75□□□□□ -0.37
NSMCE1-204ENST00000563273 EEF1GP26641 437 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms