RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ARL4AP40617 200 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 CDKN2BP42772 138 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 CXCR3P49682 368 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 LMNB2Q03252 620 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 C2orf54Q08AI8 447 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 TWF1Q12792 350 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 MTA1Q13330 715 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 GPM6BQ13491 265 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 CCNG2Q16589 344 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 ERCC6LQ2NKX8 1250 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 PLPP4Q5VZY2 271 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 KAZNQ674X7 775 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 TXNRD3NBQ6F5E7 133 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 C8orf74Q6P047 294 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 AADACL2Q6P093 401 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 MSANTD2Q6P1R3 559 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 LILRA6Q6PI73 481 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 BNIPLQ7Z465 357 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 FAM131BQ86XD5 332 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 RFX6Q8HWS3 928 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 KLHL7Q8IXQ5 586 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 DOCK4Q8N1I0 1966 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 KREMEN2Q8NCW0 462 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.71□□□□□ -0.69
USP3-219ENST00000561326 DQX1Q8TE96 717 aaKnown RBP10.71□□□□□ -0.69
USP3-219ENST00000561326 NTAN1Q96AB6 310 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 SERPINB11Q96P15 392 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 PEBP4Q96S96 227 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 KRT12Q99456 494 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 GDF15Q99988 308 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 SNRNP25Q9BV90 132 aaKnown RBP10.71□□□□□ -0.69
USP3-219ENST00000561326 HEMGNQ9BXL5 484 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 FRMD8P1Q9BZ68 369 aaPredicted RBP10.71□□□□□ -0.69
USP3-219ENST00000561326 SMOC2Q9H3U7 446 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 DHX35Q9H5Z1 703 aaKnown RBP10.71□□□□□ -0.69
USP3-219ENST00000561326 NMUR1Q9HB89 426 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 PIGVQ9NUD9 493 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 KLHL11Q9NVR0 708 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP3-219ENST00000561326 SMARCAL1Q9NZC9 954 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 TRPM5Q9NZQ8 1165 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 GMIPQ9P107 970 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 RCOR3Q9P2K3 495 aaPredicted RBP10.71□□□□□ -0.69
USP3-219ENST00000561326 AP4E1Q9UPM8 1137 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 YIPF1Q9Y548 306 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 INSL5Q9Y5Q6 135 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 OBSL1O75147 1896 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 hCG_1818297A0A087WSY0 165 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 C3orf70A6NLC5 250 aaPredicted RBP10.7□□□□□ -0.7
USP3-219ENST00000561326 H3BNC9 293 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 H3BRJ5 948 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 DYNC1I1O14576 645 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 IRAK2O43187 625 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 PHF2O75151 1096 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 ZDHHC11BP0C7U3 371 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 SPATA31D3P0C874 917 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 KRT10P13645 584 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 L1CAMP32004 1257 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 BMP8BP34820 402 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 ATP5C1P36542 298 aaKnown RBP10.7□□□□□ -0.7
USP3-219ENST00000561326 NNTQ13423 1086 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 MTMR3Q13615 1198 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 PPP2R5DQ14738 602 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 DPYSL2Q16555 572 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 TAZQ16635 292 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 CYP1B1Q16678 543 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 RAB6CQ53S08 254 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 PPP6R3Q5H9R7 873 aaPredicted RBP10.7□□□□□ -0.7
USP3-219ENST00000561326 C10orf120Q5SQS8 335 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 HECTD3Q5T447 861 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 ACBD5Q5T8D3 534 aaPredicted RBP10.7□□□□□ -0.7
USP3-219ENST00000561326 SNX30Q5VWJ9 437 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 SPATA31D4Q6ZUB0 917 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 BBS12Q6ZW61 710 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 CYP4V2Q6ZWL3 525 aaPredicted RBP10.7□□□□□ -0.7
USP3-219ENST00000561326 DNAJB7Q7Z6W7 309 aaPredicted RBP10.7□□□□□ -0.7
USP3-219ENST00000561326 NOA1Q8NC60 698 aaKnown RBP10.7□□□□□ -0.7
USP3-219ENST00000561326 LRRN4CLQ8ND94 238 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 ADAM32Q8TC27 787 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 FAM71BQ8TC56 605 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 GRK7Q8WTQ7 553 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 HDAC7Q8WUI4 952 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 PSMG2Q969U7 264 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 ACSF2Q96CM8 615 aaPredicted RBP10.7□□□□□ -0.7
USP3-219ENST00000561326 RNF157Q96PX1 679 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 ZNF670Q9BS34 389 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 RAB6CQ9H0N0 254 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 PLEKHA4Q9H4M7 779 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 SLC28A3Q9HAS3 691 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 PCDH18Q9HCL0 1135 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.7□□□□□ -0.7
USP3-219ENST00000561326 MARCH2Q9P0N8 246 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 STIM2Q9P246 746 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 TLR6Q9Y2C9 796 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 DOCK6Q96HP0 2047 aa10.7□□□□□ -0.7
USP3-219ENST00000561326 TARSL2A2RTX5 802 aaKnown RBP10.69□□□□□ -0.7
USP3-219ENST00000561326 H0YGN5 161 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 GRM6O15303 877 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 DAPK3O43293 454 aa10.69□□□□□ -0.7
USP3-219ENST00000561326 CST8O60676 142 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms