RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 REXO1L1PQ8IX06 675 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 ADGRG2Q8IZP9 1017 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 DCLK2Q8N568 766 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 SLC4A11Q8NBS3 891 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 TTC8Q8TAM2 541 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 USP33Q8TEY7 942 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 HNRNPLLQ8WVV9 542 aaKnown RBP7.25□□□□□ -1.25
SPG11-224ENST00000561268 GAB3Q8WWW8 586 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 SMARCE1Q969G3 411 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 WBP2Q969T9 261 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 EXOC4Q96A65 974 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 LOXL4Q96JB6 756 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 ZC3H10Q96K80 434 aaKnown RBP7.25□□□□□ -1.25
SPG11-224ENST00000561268 ARID3AQ99856 593 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 CCSER2Q9H7U1 834 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 CD248Q9HCU0 757 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 FAM49BQ9NUQ9 324 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.25□□□□□ -1.25
SPG11-224ENST00000561268 OSER1Q9NX31 292 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 RAB20Q9NX57 234 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 TBC1D14Q9P2M4 693 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.25□□□□□ -1.25
SPG11-224ENST00000561268 NCOR2Q9Y618 2525 aa7.25□□□□□ -1.25
SPG11-224ENST00000561268 CETN3O15182 167 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 CYP26A1O43174 497 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 CACNG3O60359 315 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 ATG13O75143 517 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 EPN2O95208 641 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 ZRANB2O95218 330 aaKnown RBP eCLIP7.24□□□□□ -1.25
SPG11-224ENST00000561268 ADH1CP00326 375 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 RETP07949 1114 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 ADH5P11766 374 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 PBX1P40424 430 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 ID4P47928 161 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 GALK1P51570 392 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 MRPS21P82921 87 aaKnown RBP7.24□□□□□ -1.25
SPG11-224ENST00000561268 LMNB2Q03252 620 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 PDE4CQ08493 712 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 NR1H3Q13133 447 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 ORC1Q13415 861 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 ARID5BQ14865 1188 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 FILIP1LQ4L180 1135 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 PLA2G2CQ5R387 149 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 PPP1R26Q5T8A7 1209 aaPredicted RBP7.24□□□□□ -1.25
SPG11-224ENST00000561268 CDKAL1Q5VV42 579 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 RNF43Q68DV7 783 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 ANKRD40Q6AI12 368 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 SMYD5Q6GMV2 418 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 RHBDF2Q6PJF5 856 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 HTR3DQ70Z44 454 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 SCD5Q86SK9 330 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 TTC30AQ86WT1 665 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 FAM217AQ8IXS0 508 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 SCML4Q8N228 414 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 RPLP0P6Q8NHW5 317 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 CCDC26Q8TAB7 109 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 OLIG1Q8TAK6 271 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 LMO3Q8TAP4 145 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 UBXN4Q92575 508 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 CYFIP2Q96F07 1278 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 DHTKD1Q96HY7 919 aaPredicted RBP7.24□□□□□ -1.25
SPG11-224ENST00000561268 CEP63Q96MT8 703 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 BAG1Q99933 345 aaPredicted RBP7.24□□□□□ -1.25
SPG11-224ENST00000561268 KLF16Q9BXK1 252 aaPredicted RBP7.24□□□□□ -1.25
SPG11-224ENST00000561268 DUSP16Q9BY84 665 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 UBXN6Q9BZV1 441 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 LINC00597Q9H2U6 94 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 NMUR1Q9HB89 426 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 TLR8Q9NR97 1041 aaKnown RBP7.24□□□□□ -1.25
SPG11-224ENST00000561268 CISHQ9NSE2 258 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 CLIC5Q9NZA1 410 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 CFAP97Q9P2B7 532 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 NCDNQ9UBB6 729 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 GMEB2Q9UKD1 530 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 MAN1B1Q9UKM7 699 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 MMP17Q9ULZ9 603 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 DOCK9Q9BZ29 2069 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 WDR87Q6ZQQ6 2873 aa7.24□□□□□ -1.25
SPG11-224ENST00000561268 PTPRBP23467 1997 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 CCDC151A5D8V7 595 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 USP27XA6NNY8 438 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.23□□□□□ -1.25
SPG11-224ENST00000561268 PPP1R3GB7ZBB8 358 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 O00370 1275 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 GFRA2O00451 464 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 PSMA7O14818 248 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 P4HA2O15460 535 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 FOXD2O60548 495 aaPredicted RBP7.23□□□□□ -1.25
SPG11-224ENST00000561268 CCDC175P0C221 793 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 MBL2P11226 248 aaPredicted RBP7.23□□□□□ -1.25
SPG11-224ENST00000561268 HNRNPLP14866 589 aaKnown RBP eCLIP7.23□□□□□ -1.25
SPG11-224ENST00000561268 TRIM21P19474 475 aaKnown RBP7.23□□□□□ -1.25
SPG11-224ENST00000561268 FMO5P49326 533 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 ZNF132P52740 706 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 LIMK1P53667 647 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 BCAT1P54687 386 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 MAP3K7CLP57077 242 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 SRSF5Q13243 272 aaKnown RBP7.23□□□□□ -1.25
SPG11-224ENST00000561268 CUL2Q13617 745 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 DMC1Q14565 340 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms