RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 MCL1Q07820 350 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 STK3Q13188 491 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 EARS2Q5JPH6 523 aaKnown RBP3.93□□□□□ -1.78
USP8-216ENST00000561206 EPM2AIP1Q7L775 607 aaPredicted RBP3.93□□□□□ -1.78
USP8-216ENST00000561206 TPH2Q8IWU9 490 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 C11orf44Q8N8P7 122 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 JPH3Q8WXH2 748 aaPredicted RBP3.93□□□□□ -1.78
USP8-216ENST00000561206 SLC25A28Q96A46 364 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 TRMT61AQ96FX7 289 aaKnown RBP3.93□□□□□ -1.78
USP8-216ENST00000561206 SCNM1Q9BWG6 230 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 STK31Q9BXU1 1019 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 BRINP2Q9C0B6 783 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 NUAK2Q9H093 628 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 TMEM60Q9H2L4 133 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 FAM83DQ9H4H8 585 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 CPNE7Q9UBL6 633 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 AFF4Q9UHB7 1163 aaKnown RBP3.93□□□□□ -1.78
USP8-216ENST00000561206 VPS51Q9UID3 782 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 USP19O94966 1318 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 SPATA31A1Q5TZJ5 1347 aa3.93□□□□□ -1.78
USP8-216ENST00000561206 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.92□□□□□ -1.78
USP8-216ENST00000561206 CAPN8A6NHC0 703 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 ISM1B1AKI9 464 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 FAM227AF5H4B4 570 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 CTIFO43310 598 aaKnown RBP3.92□□□□□ -1.78
USP8-216ENST00000561206 GRID2O43424 1007 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 AKAP10O43572 662 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 EPN2O95208 641 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 MBPP02686 304 aaPredicted RBP3.92□□□□□ -1.78
USP8-216ENST00000561206 MYBP10242 640 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 IL1R1P14778 569 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 RBL1P28749 1068 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 NTSR1P30989 418 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 IL6STP40189 918 aaPredicted RBP3.92□□□□□ -1.78
USP8-216ENST00000561206 CPT1AP50416 773 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 COPAP53621 1224 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 SUMO3P55854 103 aaPredicted RBP3.92□□□□□ -1.78
USP8-216ENST00000561206 CLCA4Q14CN2 919 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 MANEAQ5SRI9 462 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 FAM57BQ71RH2 274 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 TFAP2DQ7Z6R9 452 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 NR2C2APQ86WQ0 139 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.92□□□□□ -1.78
USP8-216ENST00000561206 BCAS4Q8TDM0 211 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 SMCR8Q8TEV9 937 aaPredicted RBP3.92□□□□□ -1.78
USP8-216ENST00000561206 P2RY11Q96G91 374 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 MLXIPLQ9NP71 852 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 VPS45Q9NRW7 570 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 SACM1LQ9NTJ5 587 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 ARL8BQ9NVJ2 186 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 DNAJB11Q9UBS4 358 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 DKK4Q9UBT3 224 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 ZNF180Q9UJW8 692 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 HDAC9Q9UKV0 1011 aa3.92□□□□□ -1.78
USP8-216ENST00000561206 SIRT4Q9Y6E7 314 aaPredicted RBP3.92□□□□□ -1.78
USP8-216ENST00000561206 SLC22A23A1A5C7 686 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 ZNF814B7Z6K7 855 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 RAB27BO00194 218 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 CA12O43570 354 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 TXNP10599 105 aaKnown RBP3.91□□□□□ -1.78
USP8-216ENST00000561206 BRAFP15056 766 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 RPS6KB1P23443 525 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 HOXA7P31268 230 aaPredicted RBP3.91□□□□□ -1.78
USP8-216ENST00000561206 GALNSP34059 522 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 HTR7P34969 479 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 PGGT1BP53609 377 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 SLC12A2P55011 1212 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 WDR5P61964 334 aaKnown RBP3.91□□□□□ -1.78
USP8-216ENST00000561206 RPS16P62249 146 aaKnown RBP3.91□□□□□ -1.78
USP8-216ENST00000561206 CCDC15Q0P6D6 951 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 KEAP1Q14145 624 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 SLC29A2Q14542 456 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 TTF1Q15361 905 aaPredicted RBP3.91□□□□□ -1.78
USP8-216ENST00000561206 PRTGQ2VWP7 1150 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 APOA5Q6Q788 366 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 RFX8Q6ZV50 586 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 KIAA0319LQ8IZA0 1049 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 FAM71DQ8N9W8 422 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 ZDHHC12Q96GR4 267 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 HIST1H2AAQ96QV6 131 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 CINPQ9BW66 212 aaPredicted RBP3.91□□□□□ -1.78
USP8-216ENST00000561206 ZCWPW1Q9H0M4 648 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 AGO4Q9HCK5 861 aaKnown RBP3.91□□□□□ -1.78
USP8-216ENST00000561206 TYW1Q9NV66 732 aaKnown RBP3.91□□□□□ -1.78
USP8-216ENST00000561206 MSRB1Q9NZV6 116 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 MID2Q9UJV3 735 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 PCDHA12Q9UN75 941 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 SLC27A6Q9Y2P4 619 aa3.91□□□□□ -1.78
USP8-216ENST00000561206 C16orf96A6NNT2 1141 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 F8W810 466 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 SNX2O60749 519 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 USP12O75317 370 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 NDUFB8O95169 186 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 SYF2O95926 243 aaKnown RBP3.9□□□□□ -1.79
USP8-216ENST00000561206 TPH1P17752 444 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 ALDH7A1P49419 539 aaKnown RBP3.9□□□□□ -1.79
USP8-216ENST00000561206 DNASE1L3Q13609 305 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 PTPROQ16827 1216 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 C3orf38Q5JPI3 329 aa3.9□□□□□ -1.79
USP8-216ENST00000561206 MZT2AQ6P582 158 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms