RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 DBX2Q6ZNG2 339 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 DHX40Q8IX18 779 aaKnown RBP9.83□□□□□ -0.84
SMAD3-215ENST00000560424 CSGALNACT2Q8N6G5 542 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 TOP6BLQ8N6T0 577 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 PDZD8Q8NEN9 1154 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 POMGNT1Q8WZA1 660 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 PRCCQ92733 491 aaPredicted RBP9.83□□□□□ -0.84
SMAD3-215ENST00000560424 DNAJC19Q96DA6 116 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 PDLIM2Q96JY6 352 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 LGMNQ99538 433 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 PLIN2Q99541 437 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 HNRNPABQ99729 332 aaKnown RBP9.83□□□□□ -0.84
SMAD3-215ENST00000560424 GABRG3Q99928 467 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 SYT15Q9BQS2 421 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 NRSN2Q9GZP1 204 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 PARVGQ9HBI0 331 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 DNMT3LQ9UJW3 386 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 CDH9Q9ULB4 789 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 ODF2LQ9ULJ1 636 aa9.83□□□□□ -0.84
SMAD3-215ENST00000560424 METTL12A8MUP2 240 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 B8ZZF3 427 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 PYCARD-AS1I3L0S3 204 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 BIN1O00499 593 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 TRIM24O15164 1050 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 SYNCRIPO60506 623 aaKnown RBP9.82□□□□□ -0.84
SMAD3-215ENST00000560424 TBCAO75347 108 aaKnown RBP9.82□□□□□ -0.84
SMAD3-215ENST00000560424 RFPL3O75679 317 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 WISP1O95388 367 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 IRF1P10914 325 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 IL12RB1P42701 662 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 NOP14P78316 857 aaKnown RBP9.82□□□□□ -0.84
SMAD3-215ENST00000560424 POU5F1Q01860 360 aaKnown RBP9.82□□□□□ -0.84
SMAD3-215ENST00000560424 MYO1EQ12965 1108 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 MCM6Q14566 821 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 PTPRNQ16849 979 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 HECTD3Q5T447 861 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 HS2ST1Q7LGA3 356 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 METTL3Q86U44 580 aaKnown RBP9.82□□□□□ -0.84
SMAD3-215ENST00000560424 LUZP1Q86V48 1076 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 TMEM25Q86YD3 366 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 BBS7Q8IWZ6 715 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 LRRC52Q8N7C0 313 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 SNIP1Q8TAD8 396 aaKnown RBP9.82□□□□□ -0.84
SMAD3-215ENST00000560424 FGF11Q92914 225 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 SIPA1Q96FS4 1042 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 TMEM176AQ96HP8 235 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 PPP1R9BQ96SB3 815 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 PKMYT1Q99640 499 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 NUP58Q9BVL2 599 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 TTLL2Q9BWV7 592 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 BBS2Q9BXC9 721 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 BLZF1Q9H2G9 400 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.82□□□□□ -0.842e-8■■■■■ 532.5
SMAD3-215ENST00000560424 GMIPQ9P107 970 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 USP36Q9P275 1121 aaKnown RBP9.82□□□□□ -0.84
SMAD3-215ENST00000560424 ITGA11Q9UKX5 1188 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 PCDHGA1Q9Y5H4 931 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 SNX11Q9Y5W9 270 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 KALRNO60229 2985 aa9.82□□□□□ -0.84
SMAD3-215ENST00000560424 BECN2A8MW95 431 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 PPP1R3GB7ZBB8 358 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 F8VP50 259 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 GOLGA6L19H0YKK7 550 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 HCRTO43612 131 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 PCDHGA12O60330 932 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 TMEM191BP0C7N4 346 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 TYRP14679 529 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 YWHAQP27348 245 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 DGKGP49619 791 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 TPMTP51580 245 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 ZNF132P52740 706 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 UCNP55089 124 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 TMPRSS3P57727 454 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 TPM4P67936 248 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 RBP5P82980 135 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 IL9RQ01113 521 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 BNC1Q01954 994 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 GOLGA8FQ08AF8 430 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 GOLGA8DPQ0D2H9 430 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 TARDBPQ13148 414 aaKnown RBP eCLIP9.81□□□□□ -0.84
SMAD3-215ENST00000560424 DHX8Q14562 1220 aaKnown RBP9.81□□□□□ -0.84
SMAD3-215ENST00000560424 E2F5Q15329 346 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 KIF19Q2TAC6 998 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 FUT11Q495W5 492 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 HES3Q5TGS1 186 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 FAM171BQ6P995 826 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 TPGS1Q6ZTW0 290 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 FAM124AQ86V42 546 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 OSTM1Q86WC4 334 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 CACUL1Q86Y37 369 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 TMPRSS6Q8IU80 811 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 NOC3LQ8WTT2 800 aaKnown RBP9.81□□□□□ -0.84
SMAD3-215ENST00000560424 UCMAQ8WVF2 138 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 KCNN1Q92952 543 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 IGSF8Q969P0 613 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 FBXO32Q969P5 355 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 WBP1Q96G27 269 aa9.81□□□□□ -0.84
SMAD3-215ENST00000560424 DHTKD1Q96HY7 919 aaPredicted RBP9.81□□□□□ -0.84
SMAD3-215ENST00000560424 C8orf48Q96LL4 319 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms