RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 B4GALNT2Q8NHY0 566 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 HDAC7Q8WUI4 952 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 TMEM174Q8WUU8 243 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 POMGNT1Q8WZA1 660 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 SPDL1Q96EA4 605 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 ZNF668Q96K58 619 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 SCLT1Q96NL6 688 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 TARS2Q9BW92 718 aaKnown RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 CARD6Q9BX69 1037 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 MRPL4Q9BYD3 311 aaKnown RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 INO80BQ9C086 356 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 CCDC113Q9H0I3 377 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 FAM49AQ9H0Q0 323 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 NDST4Q9H3R1 872 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 PCIF1Q9H4Z3 704 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 HDAC6Q9UBN7 1215 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 CORO1CQ9ULV4 474 aaPredicted RBP7.46□□□□□ -1.22
ZEB1-216ENST00000559496 L1RE1Q9UN81 338 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 CAPN7Q9Y6W3 813 aa7.46□□□□□ -1.22
ZEB1-216ENST00000559496 ITIH6Q6UXX5 1313 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 SCN10AQ9Y5Y9 1956 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 A0A087WZ62 844 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 SMIM35A0A1B0GVV1 85 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 GOLGA8IPA6NC78 632 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 GOLGA8JA6NMD2 632 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 TPD52L2O43399 206 aaKnown RBP7.45□□□□□ -1.22
ZEB1-216ENST00000559496 MSL3P1P0C860 447 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 CYP2C9P11712 490 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 KRT13P13646 458 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 ADSSP30520 456 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 MATR3P43243 847 aaKnown RBP eCLIP7.45□□□□□ -1.223e-6■■■□□ 19
ZEB1-216ENST00000559496 POU5F1BQ06416 359 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 TBX2Q13207 712 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-216ENST00000559496 TRIM14Q14142 442 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 E4F1Q66K89 784 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-216ENST00000559496 SLFN12LQ6IEE8 588 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 CAPRIN2Q6IMN6 1127 aaKnown RBP7.45□□□□□ -1.22
ZEB1-216ENST00000559496 RPTNQ6XPR3 784 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 RNF180Q86T96 592 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 ZNF410Q86VK4 478 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 KIAA0319LQ8IZA0 1049 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 PCSK9Q8NBP7 692 aaKnown RBP7.45□□□□□ -1.22
ZEB1-216ENST00000559496 KLHDC9Q8NEP7 349 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 ADCY4Q8NFM4 1077 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 TRIM58Q8NG06 486 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 KLHL6Q8WZ60 621 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 ERGIC2Q96RQ1 377 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 FDXACB1Q9BRP7 624 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-216ENST00000559496 NFKBIZQ9BYH8 718 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 ACTR5Q9H9F9 607 aaPredicted RBP7.45□□□□□ -1.22
ZEB1-216ENST00000559496 CD248Q9HCU0 757 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 TRMT1Q9NXH9 659 aaKnown RBP7.45□□□□□ -1.22
ZEB1-216ENST00000559496 ANKFY1Q9P2R3 1169 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 STRIP2Q9ULQ0 834 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 INPP5FQ9Y2H2 1132 aa7.45□□□□□ -1.22
ZEB1-216ENST00000559496 GOLGA6L7A0A1B0GV03 622 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 A0A1W2PQJ5 194 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 ACKR2O00590 384 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 KIAA0391O15091 583 aaKnown RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 MAPK13O15264 365 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 MEFVO15553 781 aaPredicted RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 AFPP02771 609 aaKnown RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 EDN1P05305 212 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 PYGLP06737 847 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 EPHX1P07099 455 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 ASGR1P07306 291 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 ADRB2P07550 413 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 PI3P19957 117 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 SFPQP23246 707 aaKnown RBP eCLIP7.44□□□□□ -1.223e-7■■□□□ 12.5
ZEB1-216ENST00000559496 HOXC8P31273 242 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 MAPKAPK2P49137 400 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 GPC3P51654 580 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 VAMP7P51809 220 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 NLRP11P59045 1033 aaKnown RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 ADAM17P78536 824 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 ZNF200P98182 395 aaPredicted RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 CDC42EP1Q00587 391 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 MBTD1Q05BQ5 628 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 BFSP1Q12934 665 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 PRPF4BQ13523 1007 aaKnown RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 SNRNP35Q16560 246 aaKnown RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 LRRC23Q53EV4 343 aaPredicted RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 FAM47CQ5HY64 1035 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 EEF1DP3Q658K8 133 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 CCSAPQ6IQ19 270 aaPredicted RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 PAQR3Q6TCH7 311 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 INTS8Q75QN2 995 aaKnown RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 SRGAP1Q7Z6B7 1085 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 CBWD2Q8IUF1 395 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 GPD1LQ8N335 351 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 ARHGEF39Q8N4T4 335 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 ZSWIM2Q8NEG5 633 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 ATL2Q8NHH9 583 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 SH3TC2Q8TF17 1288 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 SLC35C1Q96A29 364 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 RCC1LQ96I51 464 aaKnown RBP7.44□□□□□ -1.22
ZEB1-216ENST00000559496 FAM213AQ9BRX8 229 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 NUP58Q9BVL2 599 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 FZD8Q9H461 694 aa7.44□□□□□ -1.22
ZEB1-216ENST00000559496 FAM204AQ9H8W3 233 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms