RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 LRRC4Q9HBW1 653 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 ARHGEF4Q9NR80 690 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 OLA1Q9NTK5 396 aaKnown RBP10.62□□□□□ -0.71
USP3-207ENST00000558218 OSER1Q9NX31 292 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 DLL3Q9NYJ7 618 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 RWDD2AQ9UIY3 292 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 NAGPAQ9UK23 515 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 MMP17Q9ULZ9 603 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 PCDHGC3Q9UN70 934 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 PCDHGA5Q9Y5G8 931 aa10.62□□□□□ -0.71
USP3-207ENST00000558218 TBC1D3BA6NDS4 549 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 CACNG3O60359 315 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 TULP3O75386 442 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 ALDH1A2O94788 518 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 ZBED1O96006 694 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 AFPP02771 609 aaKnown RBP10.61□□□□□ -0.71
USP3-207ENST00000558218 KIR2DL1P43626 348 aaPredicted RBP10.61□□□□□ -0.71
USP3-207ENST00000558218 SLC6A11P48066 632 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 TKTL1P51854 596 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 KCNH2Q12809 1159 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 CRY1Q16526 586 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 CSRP2Q16527 193 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 ANO4Q32M45 955 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 PKDCCQ504Y2 493 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 USP39Q53GS9 565 aaKnown RBP10.61□□□□□ -0.71
USP3-207ENST00000558218 C2orf27AQ580R0 203 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 NAIF1Q69YI7 327 aaPredicted RBP10.61□□□□□ -0.71
USP3-207ENST00000558218 Q6ZNB5 142 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.61□□□□□ -0.71
USP3-207ENST00000558218 TTC30AQ86WT1 665 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 TMEM25Q86YD3 366 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 PHTF2Q8N3S3 785 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 TSTD1Q8NFU3 115 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 SRRTQ9BXP5 876 aaKnown RBP10.61□□□□□ -0.71
USP3-207ENST00000558218 CNGB3Q9NQW8 809 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 FBXO10Q9UK96 956 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 TSPAN16Q9UKR8 245 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 STRIP2Q9ULQ0 834 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 CNTN6Q9UQ52 1028 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP3-207ENST00000558218 SPTBN4Q9H254 2564 aa10.61□□□□□ -0.71
USP3-207ENST00000558218 SPAG17Q6Q759 2223 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 O00370 1275 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 BIN1O00499 593 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 STC2O76061 302 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 RHOBTB1O94844 696 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 CD19P15391 556 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 ZNF445P59923 1031 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 YWHAGP61981 247 aaKnown RBP eCLIP10.6□□□□□ -0.71
USP3-207ENST00000558218 PDE4CQ08493 712 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 BYSLQ13895 437 aaKnown RBP10.6□□□□□ -0.71
USP3-207ENST00000558218 MEA1Q16626 185 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 CT47A1Q5JQC4 288 aaPredicted RBP10.6□□□□□ -0.71
USP3-207ENST00000558218 TMEM270Q6UE05 265 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 CLEC17AQ6ZS10 378 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 ENOSF1Q7L5Y1 443 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 PPM1KQ8N3J5 372 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 SLC35F5Q8WV83 523 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 IRGQQ8WZA9 623 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 CNOT6LQ96LI5 555 aaKnown RBP10.6□□□□□ -0.71
USP3-207ENST00000558218 HSFY1Q96LI6 401 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
USP3-207ENST00000558218 USB1Q9BQ65 265 aaKnown RBP10.6□□□□□ -0.71
USP3-207ENST00000558218 POLMQ9NP87 494 aaPredicted RBP10.6□□□□□ -0.71
USP3-207ENST00000558218 ABCC13Q9NSE7 274 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 CTNND2Q9UQB3 1225 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 PCDHB4Q9Y5E5 795 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 MYO18AQ92614 2054 aaKnown RBP10.6□□□□□ -0.71
USP3-207ENST00000558218 VPS13AQ96RL7 3174 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 RALGAPA1Q6GYQ0 2036 aa10.6□□□□□ -0.71
USP3-207ENST00000558218 MYO16Q9Y6X6 1858 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 GTPBP10A4D1E9 387 aaKnown RBP10.59□□□□□ -0.71
USP3-207ENST00000558218 GFRA2O00451 464 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 NPC1O15118 1278 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 ZNF806P0C7X5 589 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 IRF1P10914 325 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 TYRP14679 529 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 ZNF132P52740 706 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 LRMPQ12912 555 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 GOLGA7BQ2TAP0 167 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 SPDYCQ5MJ68 293 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 GRAMD4Q6IC98 578 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 SDE2Q6IQ49 451 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 RSRC2Q7L4I2 434 aaKnown RBP10.59□□□□□ -0.71
USP3-207ENST00000558218 C12orf40Q86WS4 652 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 CPXM2Q8N436 756 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 TERB1Q8NA31 727 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 IL17RCQ8NAC3 791 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 TXNDC5Q8NBS9 432 aaKnown RBP10.59□□□□□ -0.71
USP3-207ENST00000558218 STK32AQ8WU08 396 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 WBP2Q969T9 261 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 PLD4Q96BZ4 506 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 RMDN1Q96DB5 314 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 HHIPQ96QV1 700 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 RTKNQ9BST9 563 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 BBS2Q9BXC9 721 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 SLC2A11Q9BYW1 496 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 SEMA4GQ9NTN9 838 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 MARCH2Q9P0N8 246 aa10.59□□□□□ -0.71
USP3-207ENST00000558218 USP18Q9UMW8 372 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms