RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 FZD4Q9ULV1 537 aa5.34□□□□□ -1.55
SCFD1-221ENST00000556534 DAAM1Q9Y4D1 1078 aa5.34□□□□□ -1.55
SCFD1-221ENST00000556534 AQP12BA6NM10 295 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 UBE2Q2LH0YL09 131 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 J3KTA2 159 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 PIP5K1BO14986 540 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 TMIGD3P0DMS9 266 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-221ENST00000556534 CYP2A6P11509 494 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-221ENST00000556534 NPPBP16860 134 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 GALNSP34059 522 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 TNFAIP2Q03169 654 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 CCDC15Q0P6D6 951 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 FOXF2Q12947 444 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 MFSD13AQ14CX5 517 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 CCDC142Q17RM4 750 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 CERKLQ49MI3 558 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-221ENST00000556534 TMEM65Q6PI78 240 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 RASGRP3Q8IV61 690 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 C8orf58Q8NAV2 365 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 ADAMTS18Q8TE60 1221 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 DDB2Q92466 427 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 CINPQ9BW66 212 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-221ENST00000556534 USP29Q9HBJ7 922 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 PLCB1Q9NQ66 1216 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 HELLSQ9NRZ9 838 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 SEMA5BQ9P283 1151 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 PCDHB2Q9Y5E7 798 aa5.33□□□□□ -1.56
SCFD1-221ENST00000556534 GOLGA6L3A6NEY3 463 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 M0QZQ0 153 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 NTSR2O95665 410 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 SRGAP2BP0DMP2 458 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 MORC3Q14149 939 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 C4orf46Q504U0 113 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 TMEM63BQ5T3F8 832 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 CCDC144NLQ6NUI1 221 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 MSANTD2Q6P1R3 559 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 SRRM1Q8IYB3 904 aaKnown RBP5.32□□□□□ -1.56
SCFD1-221ENST00000556534 ZNF398Q8TD17 642 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 OVCA2Q8WZ82 227 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 HIC2Q96JB3 615 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 CCDC17Q96LX7 622 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 HS6ST2Q96MM7 605 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 LRCH1Q9Y2L9 728 aa5.32□□□□□ -1.56
SCFD1-221ENST00000556534 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 FYB1O15117 783 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 FFAR2O15552 330 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 CTIFO43310 598 aaKnown RBP5.31□□□□□ -1.56
SCFD1-221ENST00000556534 ASNA1O43681 348 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 TAF5LO75529 589 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 ITGA5P08648 1049 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 PDIA3P30101 505 aaKnown RBP5.31□□□□□ -1.56
SCFD1-221ENST00000556534 GSTM5P46439 218 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 MRPS21P82921 87 aaKnown RBP5.31□□□□□ -1.56
SCFD1-221ENST00000556534 GALNT1Q10472 559 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-221ENST00000556534 GRM1Q13255 1194 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 SLC14A1Q13336 389 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 BFSP2Q13515 415 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 SEC23BQ15437 767 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 CEP78Q5JTW2 689 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 FAM71BQ8TC56 605 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 STYXQ8WUJ0 223 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 C5orf34Q96MH7 638 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 OBP2BQ9NPH6 170 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 ABHD10Q9NUJ1 306 aa5.31□□□□□ -1.56
SCFD1-221ENST00000556534 CCDC187A0A096LP49 1063 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 LGALS16A8MUM7 142 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 CLIC1O00299 241 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 NPC1O15118 1278 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 TUBB4AP04350 444 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 ANXA6P08133 673 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 CELA2AP08217 269 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 CYP2D6P10635 497 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 ALADP13716 330 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 EPHB2P29323 1055 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 JAK3P52333 1124 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 WDR5P61964 334 aaKnown RBP5.3□□□□□ -1.56
SCFD1-221ENST00000556534 SEMA3BQ13214 749 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 SPARCL1Q14515 664 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 GRM4Q14833 912 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 TRIM71Q2Q1W2 868 aaKnown RBP5.3□□□□□ -1.56
SCFD1-221ENST00000556534 C1orf228Q6PIY5 440 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 VSTM1Q6UX27 236 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 FAM71DQ8N9W8 422 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 ZNF527Q8NB42 609 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 VPS37AQ8NEZ2 397 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 POF1BQ8WVV4 589 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 PRPF18Q99633 342 aaKnown RBP5.3□□□□□ -1.56
SCFD1-221ENST00000556534 PAAF1Q9BRP4 392 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 EFHD1Q9BUP0 239 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 RNF26Q9BY78 433 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-221ENST00000556534 SEMA4CQ9C0C4 833 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 TP63Q9H3D4 680 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-221ENST00000556534 EPS8L2Q9H6S3 715 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 KCNK9Q9NPC2 374 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 PDGFCQ9NRA1 345 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 MAGED2Q9UNF1 606 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-221ENST00000556534 PCSK5Q92824 1860 aa5.3□□□□□ -1.56
SCFD1-221ENST00000556534 SPATA31A1Q5TZJ5 1347 aa5.29□□□□□ -1.56
SCFD1-221ENST00000556534 PNMA6EA0A0J9YXQ4 647 aa5.29□□□□□ -1.56
SCFD1-221ENST00000556534 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms