RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 JSRP1Q96MG2 331 aaPredicted RBP7.07□□□□□ -1.28
SYNE2-216ENST00000555002 ADGRE3Q9BY15 652 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 CAB39LQ9H9S4 337 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 MCUBQ9NWR8 336 aa7.07□□□□□ -1.28
SYNE2-216ENST00000555002 EIF3DO15371 548 aaKnown RBP eCLIP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 KLHL41O60662 606 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 RCVRNP35243 200 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CCT3P49368 545 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 PSMD7P51665 324 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 HNRNPH2P55795 449 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 COPZ1P61923 177 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 OVGP1Q12889 678 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 GNA13Q14344 377 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 NEDD8Q15843 81 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 NAPEPLDQ6IQ20 393 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 PIGKQ92643 395 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 GLT1D1Q96MS3 346 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 SEPHS2Q99611 448 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 TMEM120AQ9BXJ8 343 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 COMMD8Q9NX08 183 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 GPRC5DQ9NZD1 345 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 COPG2Q9UBF2 871 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 MAFFQ9ULX9 164 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 KPNA6O60684 536 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CETPP11597 493 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 NTSP30990 170 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 FMO5P49326 533 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CLK3P49761 638 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 EFHC1Q5JVL4 640 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 ITIH5Q86UX2 942 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 E2F7Q96AV8 911 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 FAM111AQ96PZ2 611 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 TEX13BQ9BXU2 312 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 UBP1Q9NZI7 540 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 COMMD9Q9P000 198 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 WDR35Q9P2L0 1181 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 RPS6KL1Q9Y6S9 549 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CFAP74Q9C0B2 1584 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 DIDO1Q9BTC0 2240 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 WWP2O00308 870 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 PAICSP22234 425 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 OASLQ15646 514 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 AGKQ53H12 422 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CBWD3Q5JTY5 395 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CBWD5Q5RIA9 395 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 BNC2Q6ZN30 1099 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 TMC7Q7Z402 723 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 OR2L5Q8NG80 312 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 VPS33AQ96AX1 596 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 SLC4A5Q9BY07 1137 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 GGA3Q9NZ52 723 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 F5H6K3 240 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 NPY2RP49146 381 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 EIF2B2P49770 351 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 KLRC3Q07444 240 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CLEC10AQ8IUN9 316 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 ADGRG2Q8IZP9 1017 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 RSAD1Q9HA92 442 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 MT-CO1P00395 513 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 GSTM5P46439 218 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 TBC1D25Q3MII6 688 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 MTFMTQ96DP5 389 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CELF6Q96J87 481 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CST8O60676 142 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 SPIDRQ14159 915 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 OSCP1Q8WVF1 389 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF222Q9UK12 451 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 SYNPO2Q9UMS6 1093 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 ATP7AQ04656 1500 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 IL12RB1P42701 662 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 STX5Q13190 355 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 RASSF6Q6ZTQ3 369 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 DET1Q7L5Y6 550 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 DAW1Q8N136 415 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 SPON1Q9HCB6 807 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 ASCC3Q8N3C0 2202 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 EYA4O95677 639 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 ZNF37AP17032 561 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 THOP1P52888 689 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 FCHO2Q0JRZ9 810 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 STRA8Q7Z7C7 330 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 SPPL2AQ8TCT8 520 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 CCDC177Q9NQR7 707 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 RPL4P36578 427 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 LIFRP42702 1097 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 PSMD4P55036 377 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 NUP107P57740 925 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 MCOLN3Q8TDD5 553 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 SLC9A6Q92581 669 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 C1QTNF7Q9BXJ2 289 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 ABCG4Q9H172 646 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 NOL6Q9H6R4 1146 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 SPG21Q9NZD8 308 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 STK39Q9UEW8 545 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 KIAA1257Q9ULG3 409 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 GPSM3Q9Y4H4 160 aa7.06□□□□□ -1.28
SYNE2-216ENST00000555002 PDS5AQ29RF7 1337 aaKnown RBP7.06□□□□□ -1.28
SYNE2-216ENST00000555002 ERVV-1B6SEH8 477 aa7.05□□□□□ -1.28
SYNE2-216ENST00000555002 KPNA3O00505 521 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms