RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 SEMA4BQ9NPR2 832 aaPredicted RBP4.8□□□□□ -1.64
CNOT2-216ENST00000548939 STEAP1Q9UHE8 339 aa4.8□□□□□ -1.64
CNOT2-216ENST00000548939 PROCRQ9UNN8 238 aa4.8□□□□□ -1.64
CNOT2-216ENST00000548939 ARAP3Q8WWN8 1544 aa4.8□□□□□ -1.64
CNOT2-216ENST00000548939 PTPRTO14522 1441 aa4.8□□□□□ -1.64
CNOT2-216ENST00000548939 UHRF1BP1Q6BDS2 1440 aa4.8□□□□□ -1.64
CNOT2-216ENST00000548939 SRCAPQ6ZRS2 3230 aa4.8□□□□□ -1.64
CNOT2-216ENST00000548939 PREX1Q8TCU6 1659 aa4.8□□□□□ -1.64
CNOT2-216ENST00000548939 LTBP4Q8N2S1 1624 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 ZNF335Q9H4Z2 1342 aaPredicted RBP4.79□□□□□ -1.64
CNOT2-216ENST00000548939 CAPN8A6NHC0 703 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 C2CD4BA6NLJ0 364 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 GTPBP1O00178 669 aaKnown RBP4.79□□□□□ -1.64
CNOT2-216ENST00000548939 RAB27BO00194 218 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 BRAFP15056 766 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 TNFRSF1BP20333 461 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 B4GALNT1Q00973 533 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 SLC29A2Q14542 456 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 EARS2Q5JPH6 523 aaKnown RBP4.79□□□□□ -1.64
CNOT2-216ENST00000548939 MANEAQ5SRI9 462 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 DLK2Q6UY11 383 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 OVCH2Q7RTZ1 564 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 WIPF2Q8TF74 440 aaPredicted RBP4.79□□□□□ -1.64
CNOT2-216ENST00000548939 ZNF668Q96K58 619 aaPredicted RBP4.79□□□□□ -1.64
CNOT2-216ENST00000548939 BRINP2Q9C0B6 783 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 NUAK2Q9H093 628 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 ARL8BQ9NVJ2 186 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 TMEM45AQ9NWC5 275 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 ZNF112Q9UJU3 913 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 FANCAO15360 1455 aa4.79□□□□□ -1.64
CNOT2-216ENST00000548939 AQP7P3A6NL99 342 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 SNX2O60749 519 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 TOM1O60784 492 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 PRAMEF2O60811 474 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 PLAUP00749 431 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 IBSPP21815 317 aaPredicted RBP4.78□□□□□ -1.64
CNOT2-216ENST00000548939 ACVR2AP27037 513 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 NTSR1P30989 418 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 CPT1AP50416 773 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 MCL1Q07820 350 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 TTF1Q15361 905 aaPredicted RBP4.78□□□□□ -1.64
CNOT2-216ENST00000548939 SWSAP1Q6NVH7 229 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 USP49Q70CQ1 688 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 EPM2AIP1Q7L775 607 aaPredicted RBP4.78□□□□□ -1.64
CNOT2-216ENST00000548939 RBMXL3Q8N7X1 1067 aaKnown RBP4.78□□□□□ -1.64
CNOT2-216ENST00000548939 SLC25A28Q96A46 364 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 NMD3Q96D46 503 aaKnown RBP4.78□□□□□ -1.64
CNOT2-216ENST00000548939 TRMT61AQ96FX7 289 aaKnown RBP4.78□□□□□ -1.64
CNOT2-216ENST00000548939 HIST1H2AAQ96QV6 131 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 CTAGE1Q96RT6 745 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 RTFDC1Q9BY42 306 aaPredicted RBP4.78□□□□□ -1.64
CNOT2-216ENST00000548939 C22orf23Q9BZE7 217 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 VPS33BQ9H267 617 aa4.78□□□□□ -1.64
CNOT2-216ENST00000548939 AFF4Q9UHB7 1163 aaKnown RBP4.78□□□□□ -1.64
CNOT2-216ENST00000548939 CFAP69A5D8W1 941 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 ISM1B1AKI9 464 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 RRHO14718 337 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 AKAP10O43572 662 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 CTNND1O60716 968 aaKnown RBP4.77□□□□□ -1.65
CNOT2-216ENST00000548939 SYF2O95926 243 aaKnown RBP4.77□□□□□ -1.65
CNOT2-216ENST00000548939 ZKSCAN1P17029 563 aaPredicted RBP4.77□□□□□ -1.65
CNOT2-216ENST00000548939 TPH1P17752 444 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 IL6STP40189 918 aaPredicted RBP4.77□□□□□ -1.65
CNOT2-216ENST00000548939 JAK3P52333 1124 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 EIF4A1P60842 406 aaKnown RBP4.77□□□□□ -1.65
CNOT2-216ENST00000548939 CCDC15Q0P6D6 951 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 C3orf38Q5JPI3 329 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 CLEC9AQ6UXN8 241 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 CINPQ9BW66 212 aaPredicted RBP4.77□□□□□ -1.65
CNOT2-216ENST00000548939 TMEM60Q9H2L4 133 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 FAM83DQ9H4H8 585 aa4.77□□□□□ -1.65
CNOT2-216ENST00000548939 LACTBL1A8MY62 500 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 PRSS44E7EML9 344 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 CA12O43570 354 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 IGSF3O75054 1194 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 USP12O75317 370 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 FGF2P09038 288 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 RAB27AP51159 221 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 CNN3Q15417 329 aaKnown RBP4.76□□□□□ -1.65
CNOT2-216ENST00000548939 PRTGQ2VWP7 1150 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 APOA5Q6Q788 366 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 FAM57BQ71RH2 274 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 AKNAQ7Z591 1439 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 ADHFE1Q8IWW8 467 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 YAF2Q8IY57 180 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 BCAS4Q8TDM0 211 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 PIGKQ92643 395 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 FCRL5Q96RD9 977 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 ZPBPQ9BS86 351 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 TMEM8AQ9HCN3 771 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 DDX56Q9NY93 547 aaKnown RBP4.76□□□□□ -1.65
CNOT2-216ENST00000548939 DNAJB11Q9UBS4 358 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 DKK4Q9UBT3 224 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 MID2Q9UJV3 735 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 TPCN1Q9ULQ1 816 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 SLC27A6Q9Y2P4 619 aa4.76□□□□□ -1.65
CNOT2-216ENST00000548939 NOP58Q9Y2X3 529 aaKnown RBP4.76□□□□□ -1.65
CNOT2-216ENST00000548939 SIRT4Q9Y6E7 314 aaPredicted RBP4.76□□□□□ -1.65
CNOT2-216ENST00000548939 ARHGEF40Q8TER5 1519 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms